Sphingomonas naphthae: PQ455_02275
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Entry
PQ455_02275 CDS
T08850
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00020
Citrate cycle (TCA cycle)
snap00785
Lipoic acid metabolism
snap01100
Metabolic pathways
snap01110
Biosynthesis of secondary metabolites
snap01120
Microbial metabolism in diverse environments
snap01200
Carbon metabolism
snap01210
2-Oxocarboxylic acid metabolism
Module
snap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PQ455_02275
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PQ455_02275
Enzymes [BR:
snap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PQ455_02275
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WCT74078
LinkDB
All DBs
Position
complement(455208..458129)
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AA seq
973 aa
AA seq
DB search
MGFEGSSFDELEGVSPAFAEALYRRFRDDPQSVEADWRDYFSGLESAVSGPSWARKNWPL
TDTDALTAGLDPTQMEPAPKPAKPGAKPAPAAAPAADPAASAASIASAVSDSIRATMLIR
TYRVRGHLLADLDPLGMARLEEPADLEPSFHGFTDADMDRPIYLGGQLGFETATLRQLVG
TLRANYCGHVGLEYMHIQDVEERRFLQERFEGKDKEISFTAEGKKAILGKVVEGEQWEKF
LARKYVGTKRFGLDGGESMIPAFEAIIKYGGQSGISEMVIGMAHRGRLNVLTNVMAKPYR
ALFSEFAGGSANPDDVGGSGDVKYHLGTSTDREFDGKRVHLSLCPNPSHLEAVDPVVLGK
SRAKQTRIDDIERARVLPILVHGDAAFAGQGIIMECFGFSGLRGYSTGGTLHFVINNQVG
FTTSPQFARSSPYCSDIAKMVQAPILHVNGDDPEAVTYACKVAVDFRQKFKRDVVIDMWC
YRRFGHNEGDEPGFTQPQMYDAIKTHPPVSSLYTKRLVEEGVIDADWTKAQEDAFVARLE
GEFEAAKHYKVNKADWFEGEWTGFAAPREAITERRSAVSGVEVERLQALGKQLTTVPEGL
TVHRTLNRILDAKKAMFESGEGFDWATAEALAYGTLLQDGYAVRLSGQDSGRGTFSQRHA
VWVDQKDGHKYIPLSAMDRRFQVLDSPLSEFGVLGFEYGYASAAPNTLVLWEAQFGDFVN
GAQVMIDQFIASGEAKWLRVNGLVMLLPHGYEGQGPEHSSARPERFLQLCAEDNIQVANC
TTPANYYHILRRQMLRKFRKPLIIMTPKSLLRHKAAVSSLEDLAEGSRFHRVLFDPKAPE
GAAVKRLVLCSGKVYYDLAEARDQAGDTDTMILRVEQLYPFPGDVLEEVLATLPNVETIV
WAQEEPKNNGYWFFVEPLIEEVLERAGKAPMRAVYAGRRASAATATGLAKNHAAQQAALV
AEALGHETVTKGK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgagggtagcagcttcgacgagttggagggcgtgagcccggccttcgcggag
gcgctgtaccgccgctttcgcgacgatccgcagagcgtggaagcggactggcgcgactat
ttctccgggctggaaagcgcggtttcgggcccgagctgggcgcgcaagaactggccgctg
accgacaccgacgcgctgaccgcgggcctcgacccgacccagatggagccggcgccgaag
ccggccaagccgggcgccaagcccgcccctgccgccgcccccgccgccgacccggccgca
tccgccgcctcgatcgcctcggccgtgtcggattcgatccgcgcgacgatgctgatccgc
acctatcgcgtgcgcggccacctgctcgccgatctcgatccgctcggcatggcgcggctg
gaggagccggccgatctggagccgagcttccacggcttcaccgacgccgacatggaccgc
ccgatctacctcggcggccagctgggcttcgagaccgcgacgctgcgccagctcgtcggc
accctgcgcgccaattactgcggccatgtcggcctggaatatatgcatatccaggacgtg
gaggagcgtcgcttccttcaggagcgcttcgagggcaaggacaaggaaatcagcttcacc
gccgagggcaagaaggccattctcggcaaggtcgtcgaaggcgagcagtgggagaaattc
ctcgcccgcaagtatgtcggcaccaagcgcttcggcctcgacggcggcgaatcgatgatc
cccgcgttcgaggcgatcatcaagtacggcggccagtcgggcatttccgaaatggtcatc
ggcatggcccatcgcggccgcctgaacgtgctgaccaacgtgatggccaagccctatcgc
gcgctgttctcggaattcgcgggcggatcggccaaccccgacgacgtgggtggctccggc
gacgtgaaatatcacctcggcacctcgaccgaccgggagttcgacggcaagcgcgtccac
ctgtcgctctgcccgaacccgtcgcatttggaagcggtcgacccggtggtgctgggcaag
agccgcgcgaagcagacccgcatcgacgatatcgagcgcgcccgcgtgctgccgatcctc
gtccatggcgacgcggccttcgccggccagggcatcatcatggaatgcttcggcttctcc
ggcctgcgcggttactcgacgggcggcacgctgcatttcgtcatcaacaaccaggtcggc
ttcaccaccagcccgcagttcgcgcgctcgtcgccttattgctcggacatcgccaagatg
gtgcaggcgccgatcctgcacgtgaacggcgacgatcccgaggcggtgacctacgcctgc
aaggtggcggtcgatttccgccagaagttcaagcgcgacgtcgtgatcgacatgtggtgc
tatcgccgcttcggtcacaacgagggcgacgagccgggcttcacccagccgcagatgtat
gatgcgatcaagacgcatccgccggtgtcgtcgctctacaccaagcggctggtcgaggag
ggcgtgatcgacgccgactggaccaaggcgcaggaagacgccttcgtcgcccggctggaa
ggcgagttcgaggcggccaagcattacaaggtcaacaaggccgactggttcgagggcgag
tggaccggcttcgccgccccgcgcgaggccatcaccgagcgtcgctcggcggtgtcgggt
gtcgaggtcgagcggctccaggcgctcggcaagcagctgacgactgtgccggagggcctg
accgtccaccgcacgctcaaccgtatcctcgacgccaagaaggcgatgttcgagagcggc
gagggcttcgactgggccacggccgaggcgctcgcctacggcacgctgttgcaggacggc
tatgccgtgcgcctgtcgggccaggattcgggtcgcggcacgttcagccagcgccatgcg
gtgtgggtcgaccagaaggacggccacaaatatatcccgctctcggcgatggaccggcgc
ttccaggtgctggattccccgctgagcgagttcggcgtgctgggcttcgaatatggctat
gcgtcggccgcgccgaacacgctggtgctgtgggaagcgcagttcggcgatttcgtgaac
ggcgcgcaggtgatgatcgaccagttcatcgcgagcggcgaggcgaagtggctcagggtc
aacggcctcgtgatgctgctgccccatggctatgagggccagggccccgagcatagctcg
gcgcgcccggagcggttcctccagctatgcgcggaggacaatatccaggtcgccaactgc
acgaccccggccaattattaccacatcctgcgccgccagatgctgcgcaagttccgcaag
ccgctcatcatcatgacgcccaagtcgctgctgcggcacaaggcggcggtgtcgagcctg
gaggatctggccgagggttcgcgcttccaccgcgtccttttcgatccgaaggcgcccgaa
ggcgcggcggtgaagcggctcgtgctgtgttcgggcaaggtctattacgacctggccgag
gcgcgcgatcaggccggcgacaccgacacgatgatcctgcgggttgagcagctctacccc
ttccccggcgacgtgctggaggaggttctggcgacgctgccgaacgtcgagacgatcgtc
tgggcgcaggaagagccgaagaacaacggttactggttcttcgtcgagccgctgatcgaa
gaggttctggagagggccggaaaggcaccgatgcgggcggtctatgcgggccgccgcgct
tccgccgcgaccgcgacggggctcgcgaaaaatcacgccgcccagcaggcggctctggtg
gccgaggcgctcggccacgaaacggttacgaagggcaagtaa
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