Sneathiella marina: NBZ79_00100
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Entry
NBZ79_00100 CDS
T08200
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
snea
Sneathiella marina
Pathway
snea00540
Lipopolysaccharide biosynthesis
snea01100
Metabolic pathways
snea01250
Biosynthesis of nucleotide sugars
Module
snea_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NBZ79_00100 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
snea01005
]
NBZ79_00100 (rfaD)
Enzymes [BR:
snea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NBZ79_00100 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
snea01005
]
Core region
NBZ79_00100 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
USG61375
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Position
22458..23450
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AA seq
330 aa
AA seq
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MTSRILVTGGAGFIGSNIVAALSDQGKSVVVCDWLEDGEKWKNLAKHVISDFVNPDELEG
WLESNGKGLQAIIHMGAISATTESDGDLILKRNFKPTLMLWNWATAHKTPFIYASSAATY
GDGGAGFDDTETEDALQNLHPLNLYGWSKHAFDKYVAREIASGAMTPPQWAGLKFFNVYG
PNEYHKGSMKSVIAQSYPRIAAGEAVTLFKSHNPDYEDGGQLRDFVYVKDCVSVILWLLD
NRDISGLFNLGTGKARSFKDLASAVFAAAGQQEDISYRDTPIEIRDKYQYFTEANMQKLR
AAGFGGNFHSLEDGIMDYVTEHLAKDDPYR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcgtattctggtcaccggcggcgccggttttatcggctccaacattgtcgca
gccctctctgatcaggggaaatccgtggtcgtctgtgactggctggaagacggggaaaag
tggaaaaacctggcaaaacacgtgatcagcgacttcgttaatcccgacgagctggagggc
tggctggaaagtaacggcaagggcttgcaggcaatcatccatatgggcgccatctcggcg
accacggaaagtgatggtgatttgatcctcaagcgcaatttcaagcccacgttaatgctg
tggaactgggcaaccgcccataaaaccccgtttatctatgcctcctccgccgccacctat
ggcgatggcggggctggttttgacgataccgagacggaagacgccctgcaaaacctgcat
ccgcttaatctttatggctggagcaagcatgccttcgacaagtatgtggcccgtgaaatt
gccagtggcgccatgacgccaccgcaatgggcggggctcaagtttttcaacgtgtacggc
cccaacgaatatcataagggcagcatgaaaagcgtgatcgcccaaagctatccgcgtatc
gcggcgggggaggcggtgaccctgttcaagtcccataacccggactatgaggatggcggg
cagctgcgtgatttcgtctatgtaaaggactgcgtcagcgttatcctgtggctgctggac
aaccgtgatatctctggcctgttcaatctgggcaccggaaaagcccgcagtttcaaggac
ctggccagcgccgtctttgccgccgccgggcaacaggaagacatctcctatcgcgatacg
ccgatcgagatccgcgataaataccagtatttcaccgaagccaatatgcaaaaactccgc
gccgccggcttcggcggcaacttccacagtctcgaagacggcatcatggattacgtcacc
gaacatctcgccaaagacgacccctataggtag
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