Serratia nematodiphila: NLX84_00505
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Entry
NLX84_00505 CDS
T08619
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NLX84_00505 (hmsP)
Enzymes [BR:
snem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NLX84_00505 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
UTO01634
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All DBs
Position
115338..117344
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPEAKRVLNTLLPVGILSRADIVLPNEFQALHANFPPERPVPTLIARLFELPIQI
SVPLYSLERVPANQQPLAYLVLQADSFRMYQFILSILSTMLSTYLLLALILSVAITWCMN
RLMVHPLRAMAKELENISQDEAPYHQLMLPALHQDDELGLLVRNYNRNQQTLAKAHADMS
RLSTRHPVTELPNPALLNALLEQHIASSLRPERFNLLVIGIETLHEASGVMSPAMREALL
LALAKKLRGCIDENGVLAQLSNTEFAILAKGIERPFHAMQLARRIMAEINAPLTLEGLAL
RPNASIGIAHYLNQGESAEQLLRSATSAMMSAHREGKNQILFFEPSLTERTQKRLTQESE
ILHGIEQRHFTLFLQPQIDMQSNEVIGAEALLRWQQYDGSYTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQQRGIALPLAVNVSGIQMQDEAFVPHLKNLLAQYRIDPRKLLLEI
TETVRIDDLDRALALLRELHDLGLSIALDDFGMGYSSLEYLNRLKSLPIDLIKIDRSFIQ
GLPADDAMVRIVSSISEVLALPVMAEGVENAEQRDWLLQHGIRSGQGFLFARPLPREAFE
AEFCRAAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcgttaacgattaagcagatggcgacagtgtccggcgtggcgctg
gtcacgatctgcatttttatcgtgatccagttattccactttgtgcagcagcgcagggat
gactacgcccagcaactggagaatatcgctcattccgtgcgccagccgctggcggaagcg
gtgctgcgcatggacgtgccggaagccaaaagggtgctgaacacgctgttgccggtcggc
attctcagccgggcggatatcgtgttgccgaacgagtttcaggcgctgcacgccaatttc
ccgccggagcggccggtgccgacgctgatcgcccggctgtttgagctgcctatccaaatt
tccgtgccgctctattcgctggagcgggtgcccgccaaccagcagccgctggcctatctg
gtgctgcaggccgattcgttccgcatgtaccagtttatcctcagcattttgtcgaccatg
ctgtcgacctatctgctgctggcgctgatcctgtcggtggccatcacctggtgcatgaac
cggttgatggtgcatccgctgcgcgcgatggccaaagagctggagaacatctcgcaggac
gaagcgccctatcaccagctgatgctgccggcgctgcaccaggacgacgagctcggcctg
ctggtgcgcaattacaaccgcaatcaacagacgctggccaaggcgcatgccgatatgagc
cgcctgagtacccgccacccggtgaccgaactgccgaatcctgcattgctgaacgcgttg
ctggaacagcatatcgcctccagtctgcgccctgagcgttttaacctgctggtgatcggc
atcgagacgctgcatgaagcgtctggcgtgatgagcccggcgatgcgtgaagcactgctg
ctggcgctggcgaagaagctgcgcggctgcatcgacgaaaacggcgtgctggcacagctg
agcaataccgaattcgccattctggccaagggcattgagcggccgttccacgccatgcag
ctggcgcggcgcatcatggcggagatcaatgcgccgttgacgctggaaggtctggcgctg
cggcccaacgccagcatcggcatcgcgcactacctcaatcagggggagagcgcggagcag
ctgctgcgcagcgccacctcggcgatgatgtccgcgcaccgcgaaggaaaaaatcagatc
ctgttcttcgaacccagcctgacggaacgcacgcagaagcggctgacgcaggagagcgag
atcctgcacggcatcgagcagcggcatttcacgctgttcctgcagccacagatcgacatg
cagtccaacgaggtgatcggcgccgaagcgctgctgcgttggcagcagtatgacggcagc
tataccctgccggccgacgttatcccgctcgcggaagagctgggcgtgatcgtgcctctc
ggcaactgggtgctggaagagtcttgccgtatcctggcggactggcagcagcgcggcatt
gcgctgccgctggcggttaacgtttccggtattcagatgcaggatgaagcgttcgtcccg
catctgaaaaacctgctggcgcagtatcggatcgatccgcgcaagctgctgctggagatc
accgagacggtacgcatcgacgatctcgatcgcgccttggcgctgctgcgcgagctgcac
gacctggggctgtcgatcgcgctggacgacttcggcatgggctattccagcctggagtac
ctcaaccgcttgaaatccctgccgatcgatttgattaagatcgaccgcagtttcattcag
gggctgccggccgacgatgcgatggtgcgcatcgtcagttcgatctccgaagtgctggcg
ttgccggtgatggccgaaggcgtggaaaacgccgaacagcgcgactggctgctgcagcac
ggcattcgcagtgggcaaggattcctgttcgcccggccgctgccgcgcgaagcgttcgaa
gccgagttttgccgcgcggcgccgtga
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