Serratia nematodiphila: NLX84_05015
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Entry
NLX84_05015 CDS
T08619
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
snem
Serratia nematodiphila
Pathway
snem00730
Thiamine metabolism
snem01100
Metabolic pathways
snem01240
Biosynthesis of cofactors
snem04122
Sulfur relay system
Module
snem_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NLX84_05015 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NLX84_05015 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snem03016
]
NLX84_05015 (thiI)
Enzymes [BR:
snem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
NLX84_05015 (thiI)
Transfer RNA biogenesis [BR:
snem03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NLX84_05015 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
UTO02440
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All DBs
Position
1072191..1073639
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILSTNIRNVLKQYDETLAVVRHWDHIEVRAKDENQR
PIIADALTRIPGIHHILEVEDRAYTDIHHIFEQTLEAYRAQLEGKTFCVRVKRRGKQAFN
SQDVERYVGGGLNQHIESARVNLTRPQVTVNLEIEDDKLMLVKRRLEGIGGYPVGTQEDV
MSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGGAAHEIGVKQVAHYLWNRFASSHKVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKLAREIGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EEEESHFDFSILDRVVSEAKNVDIRSIAEQAQEQVTEVETVAAFGADEVILDIRSNDEQE
EKPLQLEQVEVKALPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgcttg
cgctttatcaagattctctcgaccaatattcgcaacgtcctgaagcagtatgatgaaacg
ctggcggtcgtccgtcactgggatcatatcgaagttcgcgccaaagatgaaaaccagcgg
ccgatcatcgccgacgcgctgacgcgcattcccggcatccaccatattctggaagtggaa
gatcgcgcttataccgacatccaccacatcttcgagcagacgctggaagcctaccgcgcc
cagctggaaggcaaaaccttctgcgtgcgcgtcaagcgtcgcggcaagcaggcgttcaat
tcgcaggacgtggagcgttacgtcggcggcggcctgaaccagcatatcgagagcgcgcgc
gttaacctgacccgcccgcaggtcacggtaaacctcgagattgaagacgacaagctgatg
ctggtcaaacgccgcctcgaaggcatcggcggttacccggtcggcacccaggaagacgtg
atgtcgctgatttccggcggtttcgactcgggcgtgtccagctatatgctgatgcgccgc
ggctgccgcgtgcacttctgcttcttcaacctgggcggcgccgcgcatgagattggcgtg
aagcaggtggcgcactacctgtggaaccgtttcgccagctcgcacaaggtgcgcttcgtc
gccatcgacttcgagccggtggtgggcgagatcctggagaaggtcgatgacggccagatg
ggcgtggtgctcaagcgcatgatggtgcgtgccgcttcgcaagtggccgaacgctacggc
gtgcaggcgctggtaaccggtgaggcgctggggcaggtgtccagccagacgctgaccaac
ctgcgcttgatcgacaatgcgtccgatacgctgatcctgcgtccgctgatttcgcacgat
aaagagcacatcatcaagctggcgcgcgaaatcggcaccgaagacttcgccaaaaccatg
ccggaatattgcggcgtgatttcgaagagcccgacggtgaaagccgtcaaggccaagatc
gaagaggaagagagccacttcgatttcagcattctcgatcgggtggtgagcgaagcgaag
aacgtcgatattcgctccatcgccgagcaggcgcaggagcaggtgactgaagtggaaacc
gttgcggccttcggcgccgacgaggtgatcctggatatccgctccaacgacgagcaggaa
gagaagccgctgcagctggaacaggttgaagtgaaagcgttgccgttctacaagctgagc
acccagttcggcgatttggatcagagcaaaacctatctgctgtactgcgagcgcggcgta
atgagccgcctgcaggcgctgtacctgctggagcagggcttcagcaacgtgaaggtttat
cgcccgtaa
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