Serratia nematodiphila: NLX84_24455
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Entry
NLX84_24455 CDS
T08619
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
snem
Serratia nematodiphila
Pathway
snem00540
Lipopolysaccharide biosynthesis
snem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NLX84_24455 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
NLX84_24455 (rfaF)
Enzymes [BR:
snem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NLX84_24455 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
Core region
NLX84_24455 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
UTO01451
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All DBs
Position
5145515..5146561
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKAEYPSAEIDVMAPAWCRPLLARMPEVNQALAMPLG
HGALGLGERRRLGRALRANRYDRAYVLPNSFKSALVPFFADIPQRIGWRGEMRYGLLNDV
RLLDKTAFPLMVQRYVALAYDKGRVLRADDLPQPLLWPRLQVSDEEIADTTAAFNLTDSR
PIVGFCPGAEFGPAKRWPHYHYAALAQRLIESGYQIALFGSAKDHEAGEQIRAALQDDAR
DFCLNLAGKTQLEQAVILIAACRAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSD
KARVIRLISGYHKVRKGDAEQGYHQSLIDIQPQQVLDALTPLLVASEE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggttatcggcccttcttgggttggcgacatgatgatgtcgcaaagtctc
tatcgcaccctgaaggccgaatacccgtcggcggagatcgatgtgatggcgccggcctgg
tgccgcccgttgctggcacgcatgccggaagtcaatcaggcgctggcgatgccgctgggc
cacggcgcgctggggctcggcgagcgccgccgcctggggcgcgctctgcgcgccaaccgt
tacgatcgcgcttacgtcctgcccaactcgttcaaatccgcgctggtgcccttcttcgcc
gatatcccgcaacgcatcggctggcggggcgaaatgcgctacggcctgctgaacgacgtc
cgcttgctcgacaagaccgccttcccgttgatggtgcaacgctatgtggcgctggcctat
gacaaaggccgcgttctgcgcgccgacgatctgccgcagccgctgctgtggccgcggctg
caggtgagcgacgaagagatcgccgacaccaccgcggccttcaacctgaccgacagccgc
ccgatcgtcggcttctgcccaggcgcggagttcggccccgccaagcgctggccgcactat
cactacgcggcgctggctcagcggctgatcgagagcggctatcaaatcgcgctgttcggt
tcggcaaaagaccatgaggccggcgaacagatccgcgccgcgttgcaggacgacgcccgc
gatttctgccttaatctggccgggaaaacccagctggagcaagcagttatcctgatcgca
gcctgccgggcggtggtcagcaacgactccggtttaatgcacgttgccgcagcgttgaac
aaaccgctgatagccttatacggcccaagcagccccgacttcacgccgccgctttccgac
aaggcgcgggtcattcgcctgatcagcggctaccacaaggtgcgtaagggcgatgccgag
cagggataccaccaaagtttgatcgatattcagccgcagcaagtgttggatgcgctgacg
ccgttacttgtcgccagcgaggaatag
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