Streptomyces nojiriensis: JYK04_02525
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Entry
JYK04_02525 CDS
T07326
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00860
Porphyrin metabolism
snf01100
Metabolic pathways
snf01240
Biosynthesis of cofactors
Module
snf_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JYK04_02525 (cobD)
Enzymes [BR:
snf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
JYK04_02525 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QTI44745
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Position
2681980..2682942
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AA seq
320 aa
AA seq
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MRADRVFAYGATAGLIGDRILGDPRRGHPVAAFGRAAAAVERSLWRDDRGRGLLHTLVCA
GGATAVGALGARAVRSRPAAARIALTAAATWAVVGGTSLGREARAIGGALAAGDIEVARE
RLPHLCGRDPQALDGQQMARAVVESVAENTSDAVVGALVWGAVAGVPGLLAFRAVNTLDA
MVGHKSPRYLRYGWASARLDDLAGWPGARLTAVAAVLAGPDRRGAVRAWRADAAAHPSPN
AGPVEASFAGALGVRLGGTLAYGGRVEHRAVLNGAAGRPVEVDDIERAVRLSRQVTWLAL
GACVAARLLVSRTARRGRRG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgatcgcgtcttcgcgtacggcgccacggcgggcctgatcggcgaccggatc
ctcggggatccgcgccgagggcaccccgtggccgccttcggacgggccgccgccgccgtc
gagcgctccctgtggcgcgacgaccgcggccggggcctcctgcacaccctggtgtgcgcc
gggggcgcgaccgccgtcggagcgctgggcgcccgagccgtgcgttcccggcccgcggcc
gcccgtatcgccctgaccgccgccgccacctgggccgtcgtgggcggcacctccctgggc
cgtgaggcccgcgccatcggcggcgcgctcgccgccggggacatcgaggtggcccgggag
cggctgccccacctgtgcggacgcgacccgcaggccctggacggacagcagatggcccgc
gccgtcgtggagtccgtcgccgagaacacctccgacgcggtggtcggggcactcgtgtgg
ggcgccgtcgccggcgtccccggactgctggccttccgcgccgtgaacaccctggacgcg
atggtcggccacaagtccccccgctacctgcgctacggctgggcctccgcccggctcgac
gacctggccggctggccgggggcccggctgacggcggtcgccgccgtactggccggcccc
gaccggcggggcgccgtacgggcctggcgcgcggacgccgccgcgcacccgagcccgaac
gccggacccgtcgaggcctccttcgccggggcgctgggcgtcagactgggcggaaccctc
gcgtacggcggccgggtcgagcaccgggccgtactgaacggcgcggcggggcggccggtg
gaggtcgatgacatcgagcgggcggtccggctgtcgcggcaggtgacctggctggccctg
ggcgcctgcgtggccgcccggctgctggtctcccgtacggcacggagagggcggcgcgga
tga
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