Streptomyces nojiriensis: JYK04_04936
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Entry
JYK04_04936 CDS
T07326
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYK04_04936 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snf01007
]
JYK04_04936 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snf03016
]
JYK04_04936 (lysS)
Enzymes [BR:
snf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JYK04_04936 (lysS)
Amino acid related enzymes [BR:
snf01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JYK04_04936 (lysS)
Transfer RNA biogenesis [BR:
snf03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYK04_04936 (lysS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
QTI47091
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All DBs
Position
5253327..5255054
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AA seq
575 aa
AA seq
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MAQSSTETDWVSRFADEVIAEAERRAPGKPVVVASGLSPSGPIHLGNLREVMTPHLVADE
IRRRGIEVRHLISWDDYDRYRKVPAGVPGIDESWAQHIGRPLTSVPAPAGSAYPNWAEHF
KAAFVEAMAEMGVEYDPISQTEQYTNGVYREQVLFAMKHRGDIDAVLDQYRTKQKPGGKK
PQQKQVDEAELEAAEGSGAAAEDDGSTGEGGYFPYKPYCGQCGKDFTKVTSYDDETTEMT
YVCTEDEFTETVKLSEFNRGKLVWKVDWPMRWAYEGVIFEPSGVDHSSPGSSFQVGGQIV
HIFGGEQPIGPMYAFVGISGMAKMSSSKGGVPTPADALKIMEPQLLRWLYARRRPNQSFK
IAFDQEIQRLYDEWDKLEAKVADGSVLPADAAAHTRAVRTAAAELPRTPRPLPYRTLASV
ADITAGHDEQTLRILTDLDPTQPLTSLDEVRPRLDRAENWITTQVPADQRTLVREDADTE
LLSSLDDEGRESLRLLLEGLDSHWSLDGLTTLVYGVPKVMAGLEPDAKPTPELKVAQRTF
FALLYRLLVTRETGPRLPTLLLAVGADRVRKLLAV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtggctcagagcagcaccgagaccgactgggtctcccgtttcgcggacgaggtcatcgcc
gaggcggagcgccgagcacccggcaaacctgtcgtcgtcgcgtccggactctccccctcc
ggccccatccacctgggcaacctccgcgaggtcatgaccccgcacctggtcgcggacgag
atccgccgccggggcatcgaggtccgccacctcatctcctgggacgactacgaccggtac
cgcaaggtgcccgcgggcgtgcccggcatcgacgagtcgtgggcccagcacatcgggcgc
ccgctcacctccgtgcccgccccggccgggtccgcgtacccgaactgggccgagcacttc
aaggccgccttcgtcgaggccatggccgagatgggcgtcgagtacgacccgatcagccag
accgagcagtacacgaacggcgtctaccgcgagcaggtgctgttcgcgatgaagcaccgc
ggcgacatcgacgcggtcctcgaccagtaccgcaccaagcagaagccgggcggcaagaag
ccccagcagaagcaggtcgacgaggccgagctggaggccgccgagggctccggcgccgcc
gccgaggacgacggcagcaccggcgagggcggctacttcccgtacaagccgtactgcggc
cagtgcggcaaggacttcaccaaggtcacctcgtacgacgacgagaccaccgagatgacc
tacgtctgcaccgaggacgagttcaccgagacggtcaagctcagcgagttcaaccgcggc
aagctcgtctggaaggtcgactggccgatgcgctgggcctacgaaggcgtgatcttcgag
ccctccggcgtcgaccactcctcgcccggctcctccttccaggtcggcggccagatcgtg
cacatcttcggcggcgagcagccgatcggaccgatgtacgcgttcgtcggcatcagcggc
atggcgaagatgtcctccagcaagggcggggtcccgaccccggccgacgcgctgaagatc
atggagccgcagctgctgcgctggctctacgcccgccggcgccccaaccagtccttcaag
atcgccttcgaccaggagatccagcggctctacgacgagtgggacaagctggaggccaag
gtcgccgacggctccgtgctgcccgccgacgccgccgcgcacacccgcgccgtgcgcacc
gccgccgccgagctgccgcgcaccccgcgcccgctcccgtaccggacgctcgcctccgtc
gccgacatcaccgccggccacgacgagcagaccctgcgcatcctgaccgacctcgacccg
acgcagccgctcacctctctcgacgaggtacggccgcgcctggaccgcgccgagaactgg
atcaccacccaggtcccggccgaccagcgcaccctcgtgcgcgaggacgccgacaccgag
ctgctgtcgtccctggacgacgagggccgcgagtcgctgcggctgctcctggagggcctg
gactcgcactggtccctcgacgggctgaccaccctcgtctacggcgtcccgaaggtcatg
gccggcctcgaacccgacgccaagccgacgccggaactcaaggtcgcgcagcgcaccttc
ttcgcgctgctctaccggctcctcgtgacccgggagaccggaccgcgactgcccacgctg
ctgctggcggtgggcgccgaccgcgtgcgcaagctgctcgccgtctga
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