Streptomyces nojiriensis: JYK04_06152
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Entry
JYK04_06152 CDS
T07326
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snf03009
]
JYK04_06152 (rimO)
Enzymes [BR:
snf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JYK04_06152 (rimO)
Ribosome biogenesis [BR:
snf03009
]
Prokaryotic type
ribosomal protein modification factors
JYK04_06152 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QTI48288
LinkDB
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Position
6565078..6566577
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AA seq
499 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAARQGAEVSLPGHAQTPAEAPAEAPADLPDGLAPASGPR
APLRRRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEI
MLVSENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKV
VPYFDLSFQHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPTAGVRSNFIVGFPGEKESDF
AELERFLTHARLDAIGVFGYSDEDGTEAVTYENKLDEDTIAERLAHMQRLAEELTSQRAE
ERIGETLEVLVETVEEVDEDGEGAYGRAAHQAPETDGQVVFTDSTGLVPGRIVTAKVVGT
LGVDLVAEPLGMDLEEAAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gatgcggacgtagccgtcgtcaacacctgcggcttcgtcgaagccgccaaaaaggactcc
gtagacgccctcctggaagccaacgatctcaaggatcacggcaagacccaggccgtcgtc
gccgtcggctgtatggccgagcgctacggcaaggaactcgccgaagcgctccccgaggcc
gacggagtcctcggtttcgacgactacgccgacatctccgaccgcctccagaccatcctc
aacggtggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgcgcgccagggcgccgaggtctccctcccgggccacgcccagacgcccgccgag
gcgccggccgaggcccccgccgacctgccggacgggctcgcgcccgcctcgggcccgcgc
gcgcccctgcgccgccgcctggacaagagcccggtcgcctcggtcaagctggcctccggc
tgcgaccggcgctgctccttctgcgccatcccgtccttccgcggctccttcatctcccgc
cgccccagcgacgtgctgggcgagacccgctggctggccgagcagggcgtcaaggagatc
atgctggtctccgagaacaacacctcgtacggcaaggacctcggcgacatccggctgctg
gagaccctgctgccggagctggccgaggtggacggcatcgagcgcgtccgcgtcagctac
ctccagcccgccgagatgcggcccggcctgatcgacgtactcacctcgacccccaaggtc
gtgccgtacttcgacctgtccttccagcactcggcccccgacgtgctgcgcgccatgcgc
cgcttcggtgacaccgaccgcttcctggagctgctggacaccatccgctccaaggccccg
acggcgggcgtccgctccaacttcatcgtcggcttccccggcgagaaggaatcggacttc
gccgagctggagcgtttcctcacccacgcgcgcctcgacgccatcggcgtcttcggctac
tccgacgaggacggcaccgaggccgtcacctacgagaacaagctggacgaggacaccatc
gccgagcggctcgcgcacatgcagcggctcgccgaggagctcacctcgcagcgtgccgag
gagcgcatcggggagaccctcgaagtgctcgtcgagaccgtggaagaggtcgacgaggac
ggcgagggcgcctacgggcgcgccgcccaccaggcgcccgaaacggacggccaggtggtc
ttcacggacagcacgggcctggtccccgggcgtatcgtcacggcaaaggtggtcggcacc
ctgggcgtggacctggtggccgagcccctcggcatggatcttgaggaggcggcaggatga
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