Salvelinus namaycush (lake trout): 120019067
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Entry
120019067 CDS
T07522
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120019067 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120019067 (esr1)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
120019067 (esr1)
Nuclear receptors [BR:
snh03310
]
3. Estrogen like
3A. Estrogen receptor
120019067 (esr1)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
120019067
NCBI-ProteinID:
XP_038818227
UniProt:
A0A8U0P5B3
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Position
Sna24:complement(19804066..19850748)
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AA seq
618 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESPTISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGNREKPYGDLEHRTAPLQDGGR
NSSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMAD
KELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILD
RSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLHN
SSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKCK
NKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDIHIRSP
GSGVLQYGSPSSDQMPIP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccccaccatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccactggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaagccaccatggtctccccagccagtcatactacctggagacctcttcc
acacccttatacaggtcgagtgtggtaaccaatcagctatcagcgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacagtgcggcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcgactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaggcatgccgactcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgtggtgggcgggttctcaggaaggataagcggtattgtggccctgctggtaac
agagagaaaccctacggagacctggagcacaggacagcgccccttcaggacgggggtagg
aacagcagcagcagccttaatggtggtggaggatggcgtgggcccagaatcaccatgcct
cctgaacaggtgctgttcctgctgcagggggcagagcctccggccctgtgttctcgtcag
aaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggccgac
aaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctgtct
ctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcggactc
atatggagatccatccactgccctgggaaactcatcttcgcccaggacctcatactggac
aggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggccact
gtgtctcgcttccgcatgctcaaactgaagcctgaggagtttgtgtgcctcaaagccatc
atcttgctcaactctggtgccttctccttctgttccaactctgtggagtcccttcacaac
agctcggcagtggaaagcatgctggacaacatcactgatgccctcatccaccacatcagc
cattcaggagcctctgtgcagcagcagcccagacggcaggcccagctcctgctcctgctc
tcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgtaag
aacaaagtgcctctgtacgacctgctcctggagatgctggacggtcaccggctccaatcc
ccaggcaaagtggcccaagctggggaacagaccgagggcccctctaccaccactaccacc
tccacaggctccagcatcgggccgatgcgaggcagccaggatatccacatcagaagccct
ggttcgggggtactccagtatggctcccccagctcagaccagatgcccattccgtga
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