Salvelinus namaycush (lake trout): 120020031
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Entry
120020031 CDS
T07522
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020031
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120020031
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GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
120020031
NCBI-ProteinID:
XP_038819386
UniProt:
A0A8U0P597
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Position
Sna25:26113492..26152304
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AA seq
492 aa
AA seq
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MTALAGGIPRMMRPTHHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTTTPDVDKKIEE
YKRVNPGMFSWEIRDTLLKDGICDRNNVPSGSVSKVSSISRTMRCKFGGGAGEDEEDDDE
IEKRELEENERRAKHSIDGILGDRCNHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEE
LERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG
FPPSAMSSLQPYQLSDSPYPPTSISQKQPSTVLRPQPLPPTSVHQGGLSSSAGAQDGSSA
YCLSSGRHGFSGYSESFVPPSGHSNSVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFAL
SPLTGGLEPGVGMAASCHGSQRGLEGLPGLTSMPIMPSSQSYCPPTYSSPAYAVEHHPSY
QYGQYGQSKVGF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagctctagccgggggcataccgagaatgatgcgcccgacacaccaccagaactac
ccgcggggaggctactctctggaagtctctaccccgttaggccagggccgggtgaaccaa
ctcggtggagtctttattaacggcagacccttgcccaaccacatccgccacaagatcgtg
gagatggcccaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccac
ggctgcgtgtccaaaatcctttgccggtatcaggagaccggctccatcaggcccggggcc
atcggaggcagcaaaccgaagcagacaaccaccccagacgtggacaagaagatcgaggaa
tacaagagagtcaacccgggaatgttcagctgggaaatcagggatacattactcaaagac
ggcatctgcgacagaaacaacgtcccctcaggtagtgtttcgaaagtgagttcaatcagc
cgcaccatgcgttgtaaattcgggggaggtgcaggagaagacgaggaggacgatgatgaa
atcgagaagagggaattggaagagaacgaaagaagggcgaaacacagcatcgatggcatc
ctcggggatagatgtaaccactcagacgagggttcggatgtggactcggagccaggcctg
ccactgaagaggaaacagcgtcgcagtaggaccaccttttcagccgagcagctggaggag
ctggagagagcctttgaacgaacgcactacccagatatatacaccagagaagagctagct
cagagggccaaactcacagaggccagagtacaggtgtggttcagcaacaggagagccagg
tggagaaaacaggcgggagccaatcagctgatggcatttaatcacctgatccctggcggt
ttcccaccttcggccatgtcgagtttgcagccctatcagctgtcagacagcccctaccct
cccacctccatatcacaaaagcagcccagtacggtcctcaggcctcagcccctccccccc
acctcggtgcaccagggtgggctcagctcctcagcgggggcccaggacggtagttctgcc
tactgcctgtcttctggacgccatggcttctccggctactcggaaagcttcgtgcccccg
tccggccactccaactcagtcaaccccagcatcagcaatggtctttcaccacaggtaatg
gggctgttgaacccaggaggagtgccccaccagcccagccaccagagtgactttgccctc
tctcccctgaccggagggctggagcccggggttggcatggcggccagctgccacggctcc
caacggggcttggagggtctgccaggcctgaccagcatgcccatcatgcccagctcccag
tcctactgcccacccacctacagctcgccagcctacgccgtggaacaccacccctcctac
cagtacggacagtacggacagagcaaggtcggtttttga
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