Salvelinus namaycush (lake trout): 120021676
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Entry
120021676 CDS
T07522
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120021676
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120021676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021676
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120021676
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Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120021676
NCBI-ProteinID:
XP_038821426
UniProt:
A0A8U0P932
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Position
Sna26:complement(23363228..23391818)
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AA seq
940 aa
AA seq
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MRLFLLAVFLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPNETIPGRPIVPQCCYGFCVDLL
IKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPPDPKKKASFRS
ISTSLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttctgctggcggtgttcctctcgtgctcctgtgcgcgggctggctgcgag
ccgaagatagtgaacatcggagccgtcctgagccagaagaggtacgagcaagtctttaag
gatgcagtgacccaggcgaaccagatatacgggagagataaattcaagttgaccgccatc
tccgtaacgcacaaacccaacgctatccagatggctctctccgtctgcgaggacctcatc
tccaaccaggtgtatgccatcctcgtgagtcatcctccccagtccaacgaccacctcacc
cccacgcctgtgtcctacaccgcaggcttctaccgcatccctgtggtgggcctcaccaca
cgcatgtccatctactccgacaagagtatccacttgtcttttctgcggactgtccccccg
tactcccaccaggctcacgtgtggtttgacatgatgcgagagtttcgatggaaccacatc
atcctgatcgtcagcgatgaccacgaggggcgggccgcgcagaaaagactggagacccta
ctggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggaccaaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgcgctgcttctggaggccaaagagctggaggctcgcgtcatcatcctctccgcc
agtgaagaggatgctgctgcagtttacaaggctgcccgtttcctcaacatgacgggctcg
ggttacgtgtggctggtgggagagcgggagatgtcgggtaaagccctgagcgaggcgcca
gatggtctcattggcctccagctcatcaacggcaagaacgagtcggcccacatcaatgac
gcagtggccgtggtggcccagtccatccaggagctctttgagaaggagaacattacggag
ccgcccagaggctgcgtgggaaacaccaacatctggaagaccgggcccctcttcaaaagg
gttctgatgtcatcaaagtacccagagggcctcactggacgagtggaattcaacgacgat
ggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcattcaa
gttgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctggccg
ggaggagagacagagaaaccgcggggctttcagatgtccacgagactaaagatagtgacc
atacaccaggagccctttgtgtatgtgaaacccactgagcaggatggaacctgcaaggag
gaaaaaacattaaatggagttgcagatattaaaaaggtgatctgcactggaccaaatgag
accatcccaggacgtccaattgtacctcaatgttgttatggattctgtgttgacctactt
atcaagttagctggaaccatgaactttacctatgaagtacacctggtggctgatgggaaa
tttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaatggcatgatggga
gagctcctggggggtctggcagatatgatcgttgccccgctgacaataaacaacgaacga
gcccagtacatcgaattctccaaaccttttaagtaccaaggcctaaccatcctcgttaaa
aaggaaatccctcgcagtacactggactcgttcatgcagccgtttcagagcacactgtgg
ctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttc
agcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagacgccctcaccttg
tcgtcagccatgtggttctcctggggagtgttgcttaactccggtattggagaaggcgcg
ccgcgcagcttctcagcgagaatcttgggcatggtgtgggccggctttgccatgatcata
gtggcatcgtatactgccaacctggctgccttcctggtgctggaccggcctgaggagcgc
atcaccggcatcaacgacccgaggctgaggaacccatcagacaagttcatctatgccaca
gtgaagcagagctctgtggacatctacttccggcggcaggtggagcttagcaccatgtac
cgccacatggagaagcacaactacgagagtgccgctgaggctatccaggccgtgcgcgac
aacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaag
tgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgc
aaggacagcccctggaaacagaatgtgtccctggccattctcagttcccatgagaatggc
ttcatggaagatctagataaaacctgggtgagataccaggagtgtgactcacggagcaat
gccccagccacactcacctttgagaacatggcaggagtgttcatgctggtggctggaggc
atagcagcagggatcttcctcatctttattgagatcgcctacaagcggcacaaagacgcc
cgcaggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcag
gataggaaaagtggtagagcagagccccccgaccccaaaaagaaagcctcttttaggtcc
atcagtacctccctggcctccagcatcaagagacgtaggtcatccaaagacacgcagtac
ccacccaccgacatcacgggccagctcaacttgtccgacccgtctgtcagcacagtggtg
tga
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