Salvelinus namaycush (lake trout): 120027183
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Entry
120027183 CDS
T07522
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
snh04814
Motor proteins
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120027183
04820 Cytoskeleton in muscle cells
120027183
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120027183
04261 Adrenergic signaling in cardiomyocytes
120027183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027183
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120027183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
DUF3450
Laminin_II
TMF_DNA_bd
CLZ
CALCOCO1
DASH_Duo1
GAS
Cortex-I_coil
ERM_helical
Motif
Other DBs
NCBI-GeneID:
120027183
NCBI-ProteinID:
XP_038827985
UniProt:
A0A8U0PMT5
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Position
Sna32:13261235..13298516
Genome browser
AA seq
248 aa
AA seq
DB search
MSGNNSIDAVKRKIKVLQQQADEAEERAELLQRQVEVEKTSREQAEAEVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
EADRKYEEVARKLLIIEGDHERTEERAELAEAKARALEEELRGFDQSLKSLQASEDQYSQ
KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLANAKEENLKIHATLDQ
TLQDLNSF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaacaacagtatcgacgcggttaagcgaaagatcaaagttttacagcaacag
gcagatgaagccgaagagcgagctgaacttcttcagagacaggtcgaggtggagaaaaca
tcaagagaacaggctgaggctgaagttgcttccctgaacaggcgcatccagctggttgag
gaggagttggacagggcccaggagagactggcgaccgctctgcagaaactggaggaggca
gagaaggctgcggatgaaagtgagaggggcatgaaggtgattgagaacagggccctgaag
gatgaggagaagatggagctacaggagatccagctgaaagaggccaagcacattgctgag
gaggctgaccgcaagtacgaggaggtggctcgtaagctgctgatcatcgagggggatcac
gagcgcacagaggagagggcagagcttgctgaggccaaagccagggccctggaggaggag
ctgaggggtttcgaccaatcgctgaagtccctgcaggcctctgaagaccagtactcccag
aaggaggacaagtatgaggaagagatcaagatcctgactgacaagctcaaagaggctgag
actcgtgctgagtttgctgagaggtctgtggccaagctggaaaagaccatagatgatctg
gaagagagactggccaatgccaaggaggagaacctcaagatccatgccaccctggaccag
accctgcaggacctcaacagcttctga
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integrated database retrieval system
