Salvelinus namaycush (lake trout): 120030996
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Entry
120030996 CDS
T07522
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00780
Biotin metabolism
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120030996 (hlcs)
Enzymes [BR:
snh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
120030996 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
120030996 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
120030996 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
120030996 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
120030996
NCBI-ProteinID:
XP_038832437
UniProt:
A0A8U0PWN2
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Position
Sna3:36204567..36247209
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AA seq
947 aa
AA seq
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MLITLCYVYLWVRFQKCYTVVIRSTLHRLCGGSKTNASNVSFTFCALNPLGKPQLQKGQP
TCLQSVNKQLSPPLPEEDVFLKLGDKAIYITEPQACEDLSKWTLLWGSSLSCGPRIENIS
FIIEATSGQRVGSQAHHTTENKKVLKWSDYCLPLACSPVQPFRAVAQASVDNFSRLGVAF
MEDRLQLDNGLVPSKIVSVLLRESAFKELLEKGKSEKHITSLSLKKQTEIILSEPSPCEW
EVLSVRGDLQLTKNRKCSLLQPPEIQRALVERRGSEPLRGASPGVDSGDNSLGINHQHME
GHGRHLHLSSCHECLELENSTILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEAE
SFVGQSRRVNVTGKPPNVLVFTGGCQERFQRMRSLLGECIDMDSYTVYPLRPQQALSEPW
LESATLLVLASDEPLTPQLHARFLAYLEQGGRVLGLSSTLCPTGLALVPRKSRRSQICRL
SFTKADTTELDLSVLASGSVFVRELQSGGDPGETEVWGELKWDGDGGDKDMVIVRVTRGE
DRGEAVLCQVHLETAPNSEDIVSSQGFDELKMSNACRYEVLTEIITSLGLSCEQSQAPPA
SPVYLLATSEERRASFLKWLHTQLDKEGLLKCSKAFLKVVPSAELQAGPPLLPKGTLALV
TDAPEAQSWEQFSLQTYSQHLETRALGRTLLYTQVTPTTMDLLEGLMLQLPEEMGLTAVA
ARQTQGRGRGGNAWLSPLGCAMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPGY
QDIDLRVKWPNDIYYGNLMKLGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVMQ
HNREHGTSLEALSSAQLIGRTLTCLEQLISDFQERGSEAVLPLYYKRWMHNGTQVRLWSE
DGPQAVVVGLDDNGFLQVRSEEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagtg
gtaattcggagcaccctgcacagattgtgcggggggagcaaaaccaatgcaagtaacgtt
agctttacattctgtgccttgaatccactggggaagcctcaacttcagaaaggacaacca
acctgcctgcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgaggacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccacggatagagaacatttct
ttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactacagaa
aataaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccagtgcag
ccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcgttt
atggaagatcgccttcagctggacaatggactagtgccttcaaagatagtctctgtcctg
ctccgagaatctgcgttcaaagaacttctggagaagggaaagtcggaaaagcacatcact
tccctctccctcaaaaaacagactgagatcatcctctctgagccttctccctgcgagtgg
gaggtactctcagtgagaggcgacctccagctaacaaaaaataggaagtgcagcctgctc
caaccgccagagatccagagggctttagtggaaagacgaggctccgagcccctacgagga
gccagccctggggtggacagcggggataactcacttggcatcaaccaccagcacatggag
ggccacggccgccacctccacctctccagctgccacgagtgcctggagctggagaacagc
accatcctctccgtcaagtacgcctcggtcgacaacatccctgaccttcccgatgactac
gccacatgcacggacagcggggacgagactctggacgagtttgaggaggatgaggcagag
agctttgttggtcaaagccggcgggtcaacgttaccgggaagccccccaacgtgctggtg
ttcacgggtggctgccaggagaggttccagaggatgcgttcgctgctgggcgagtgcatc
gacatggacagctacacggtgtaccccctgaggccccagcaagccctcagtgaaccctgg
ctggagagtgccaccctgctagtgctggcctcagacgaaccccttaccccccaactccac
gctcgtttccttgcatacctggagcagggtggcagggtcctggggctctcctccaccctc
tgccccacggggctggccctggtgcccaggaagagcaggaggagccagatctgcaggcta
agcttcaccaaggctgataccacagagctggatctgagcgtgcttgccagcgggagtgtg
tttgtcagggagctgcagagtggtggggaccctggagagacagaagtctggggggagctg
aagtgggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtggagag
gaccgaggggaggctgtgctgtgtcaggtgcacctggagacggcccccaactctgaagat
attgtgtcgtctcagggttttgacgagctgaagatgagcaatgcgtgtcgctacgaggtc
ctgacggagatcattacctccctgggcctgagctgtgagcagagtcaggccccgcccgcc
agccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctcaagtggctg
cacacccagttggacaaggaagggctgctcaagtgttccaaggcattccttaaagtggtc
cccagcgcagagcttcaggctgggccccccctgctgcccaaggggaccctggctctggtc
acggatgccccagaggcccagagctgggagcagttcagcctgcagacctacagccagcac
ctggagacccgcgcgctgggacgcacccttctctacactcaggtcacccctaccaccatg
gacctactagaggggttgatgctccagctgcctgaggaaatggggttaactgctgtagcg
gctcgacagacccagggtagaggccgtggggggaatgcgtggctgagtcctctggggtgt
gccatgtttagtgtgcatgtgcaagtggctgtgagctccagactgggccagaggatcccc
ttcctgcagcacctggctgccctggctgtggtggaggccgtacgcacccttcccggttac
caggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatgaag
ctaggaggagtgttggtgacatcaacagtcatgggaccaaccttccatctcctcattggc
tgtggctttaacgtcagcaacagcaaccccaccattgccatcaacgacctggtgatgcag
cacaaccgagagcatggcacaagcctggaggcccttagctcagcccagctcatcggccgc
accctcacctgcctggagcagctcatctctgacttccaagaacgggggtcagaggccgtc
ctacccctctactacaagagatggatgcacaatgggacccaggtgcgtctgtggagtgag
gatggcccccaggctgtcgtggtgggcctcgacgacaacggcttcctgcaggtgcgctcc
gaggagcagggcgtggtctccgtgcagcctgacggcaactcctttgacatgctaaggaac
ctggtggtcaccaagcaacgctag
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