Salvelinus namaycush (lake trout): 120032565
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Entry
120032565 CDS
T07522
Name
(RefSeq) exportin-1-like
KO
K14290
exportin-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
snh03013
Nucleocytoplasmic transport
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120032565
03008 Ribosome biogenesis in eukaryotes
120032565
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120032565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120032565
03009 Ribosome biogenesis [BR:
snh03009
]
120032565
03016 Transfer RNA biogenesis [BR:
snh03016
]
120032565
03036 Chromosome and associated proteins [BR:
snh03036
]
120032565
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120032565
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120032565
Pre-60S particles
120032565
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120032565
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120032565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
120032565
NCBI-ProteinID:
XP_038834632
UniProt:
A0A8U0Q0L6
LinkDB
All DBs
Position
Sna39:17674023..17689731
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNATLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMGQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
SLNPASQNNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaattccatgtactatgacattgga
tcacagcaacgcatggcacaggaggtgctgacaaacctgaaggatcacccggacgcatgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcactg
caaattctggagactgtgatcaaaacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgatgccgcaaatgtt
gagaaagatggagtgtacattgcaaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacatcgtgggtgccagccgcaccagc
gagagcctgtgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtctttgac
ttctccagcggacagatgacccaggtcaaggccaagcacctgaaagacagtatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggaaaactcccagaatgccact
ctggtccaagccacactcgagactctcctgcgcttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagcgtcaaccagtatgag
gagcagtttgtcaacctcttcacgctcaccatgggtcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaacggaaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcatggacagctcatcgagaagagg
cctaaccttagggagacactcgtggaggctctccactacatgctgctggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccacctggcggccgagctc
tacagggagagtcccttctccacctccacctcccccctgctctctgggagccagcacttt
gacgtgccgccacgacggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaagccagaggaagtgctggtggtggagaacgaccagggcgaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcgtggaggaacctgaacacgctatgctgggcc
atcggctccatcagcggagccatgcacgaggaggacgagaagcggttcctggtcaccgtc
atcaaggacctgctgggcctctgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgttgttaacaagctctttgagttcatgcacgagactcacgatggcgtg
caggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgccactttatc
caggtgcaggtgggcgaggtgatgcccttcatcgatgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccaacaggtgcacacgttctacgaggcggtgggctacatg
atcggggcccagacggaccaggccgtgcaagagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcggagacggtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacaccccttcgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggccgtactcattgactaccagcgcaacgtccccgccgctagagagcctgaggtg
ctcagcaccatggcgaccatcgtcaacaagctgggcggacacatcaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaggag
tacccagagcataggacccatttcttctacctcctccaagcggtgaactcgcagtgcttc
ccggccttcctttccattcccccggcccagttcaaactggttctggactccattatctgg
gctttcaaacacaccatgaggaatgttgcagacactggtctgcagattctttacaccctg
ctgcaaaacgtggcccaggaggaggctgccgcacagagcttctaccagacctatttctgt
gacatcctccagcacatcttctctgtcgtcacagatacctcgcacacagcagggctaacc
atgcacgcgtccatcctggcgtacatgttcaacctggtggaggagggtaaaatcagcgcc
tccctcaacccagccagccagaacaaccagggctacgttcaggaatacgtggccaacctg
ctcaagacagccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtctg
ttcagcttgaaccaggacatccccgctttcaaggagcacctgagggacttcctggtgcag
atcaaggagtttgctggcgaggacaccacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctgcagatgtccgtccccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactga
DBGET
integrated database retrieval system
