KEGG   Salvelinus namaycush (lake trout): 120037932
Entry
120037932         CDS       T07522                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03020  RNA polymerase
snh03420  Nucleotide excision repair
snh04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120037932
  09124 Replication and repair
   03420 Nucleotide excision repair
    120037932
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    120037932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120037932
   03400 DNA repair and recombination proteins [BR:snh03400]
    120037932
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120037932
  RNA polymerase III system
   RNA polymerase III
     120037932
  RNA polymerase I system
   RNA polymerase I
     120037932
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120037932
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 120037932
NCBI-ProteinID: XP_038839821
UniProt: A0A8U0Q4V9
LinkDB
Position
Sna3:73843643..73846200
AA seq 127 aa
MSDNEGDFDDGDFDDAEEDEGLDDLENVEDEDQENVKILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattttgatgatggagactttgatgacgctgaagaggatgag
ggattggatgacctggaaaacgttgaagatgaggaccaagagaatgtgaagatcctgcct
gcaggggaggggtcgcaggccaaccagaagaggatcacaactcaatacatgaccaaatat
gaaagggccagggtgctggggacacgcgccctccagatagcgatgtgtgccccagtcatg
gtggagctggagggagagacagaccctctgcaaattgccatgaaagagctaaagtgcagg
aagatccccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgc
gacgagctcatcatcacagactga

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