Salvelinus namaycush (lake trout): 120055482
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Entry
120055482 CDS
T07522
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00601
Glycosphingolipid biosynthesis - lacto and neolacto series
snh01100
Metabolic pathways
Module
snh_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
snh_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120055482
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120055482
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
120055482
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120055482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
120055482
NCBI-ProteinID:
XP_038859273
UniProt:
A0A8U1EMZ8
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Position
Sna11:8418996..8420220
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AA seq
386 aa
AA seq
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MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDSGVVSHINSYSYRYLVNSYTFINKSF
TIPRQEAHMFSNHRYLLNHPYKCSGEKDILLLLLIKSSPENFERRRAIRSTWGNETYIRQ
DLGVTVKVMFVLGLPKQHETAQTWRRRSGGIQDNLVDEDRRHGDLVQQDFVDTFHNLTLK
LLLQFRWAHFYCPHARFLMTADNDIFVHMPNLVLYLQDMDRKGVTDFWIGHVHRGAPPIR
QKESKYYVPQEMYPWASYPDYTAGAGYVVSRDVADKIYEASLTLNASLYIDDVFMGICAN
AMGVSPQEHVYFSGEGKAPYHLCIYDKMMTSHGHVADIYELWKAATNPEVKRVTSGLFGR
LYCTAVKLTLLCRPYFNTYPCKAALL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccggcggatccgcaagtgccagtgcgtgcagttgatgaccacgtgt
ctggtgctgtcggtggtgatggtatgctgggagcagctggacagtggtgtggtgagccac
atcaactcctactcttaccgctacctggtcaacagctacactttcatcaacaagagcttc
accatcccacgacaggaggcccacatgttcagtaaccaccgctacctactcaaccacccg
tacaagtgctcaggagagaaggacattttactgcttctgctcatcaagtcctccccggag
aacttcgagagacggcgagccatacggtcgacgtggggcaacgagacctacattcgccaa
gacctgggggtgacggtgaaggtgatgtttgtgctgggccttcccaagcagcatgagact
gcccagacgtggaggaggaggagcggaggcatccaggacaaccttgtcgatgaggaccgc
aggcatggcgacttggtccagcaggactttgtggacacgttccacaacctcaccctcaag
cttctgctacagttccgctgggctcatttctactgcccgcatgcccgcttcctcatgacg
gctgacaacgacatcttcgtgcacatgcccaacctggtgctctacctgcaggacatggac
aggaagggcgtgacggacttctggatcggtcacgtgcacagaggcgcgccaccgatccgc
cagaaggaaagcaagtactacgtcccgcaagagatgtacccttgggcgtcatacccggac
tacacggcaggggccggttacgtcgtctcaagagacgtggcggacaaaatctacgaggca
tcattgacgctcaatgcctcgctgtacattgacgatgtcttcatgggcatctgtgccaat
gccatgggcgtgtcgccacaggaacatgtgtacttctcaggcgaaggcaaggcgccctac
cacttgtgcatctacgacaagatgatgacatcgcacggccatgtggccgacatttatgaa
ctatggaaagccgccacaaacccggaggtcaaaagggtcacatcgggactttttgggagg
ttgtactgcacggcagtgaaactcacccttctgtgcagaccctacttcaacacctacccc
tgcaaggcagccttgttgtag
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