Salvelinus namaycush (lake trout): 120058283
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Entry
120058283 CDS
T07522
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120058283
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120058283
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GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
120058283
NCBI-ProteinID:
XP_038862759
UniProt:
A0A8U1C6E5
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Position
Sna13:complement(15448984..15497345)
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AA seq
1059 aa
AA seq
DB search
MLSNAGVYAVKKRKKPVQKTKKTPAPEVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVCS
RLDKLSVLRLSVGYLKVKSFFKATMKKNSVLFPSENGLNINGMEATNFSKGDLLLQALNG
FVLVVTAEGHVFYASPTIQDYLGFHQSDVVHQSVFELIHTDDRAMFRRQLHFALNPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHAQSMLGDDGTRSQPNLGLFTIATPVQNPSILEIRSKTIFFQTKHKLDFTPVGVDA
RGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQKTGCWVW
VQANARLVYKGGRPDFIIARQRALLNSEGEEHLRQRKMQLPFSFTTGEALLYETGPTLDA
TEFQTNSPKIRKVGSLDPQSLLGSLLKQDESVYTQPQEPQLPIDQAFMDSRALTNVACNS
WQSSMEPQGPDGDDDGDGPSVVMQKGAVVDMIDALEKMARDGDLCEALQGLDVDAAELME
WESALLRLSQESNGTGGGDTSPELDDIMTNDIFSYVEEALFKESSQESGNQPNCSIMVNN
NPNLNLFTEVFNNNNNQDGPFTGMVSPTGVGQCKPGLLDSRSFIHNGSPVNGQIGQVTDN
GPDDLAGQNQAGPHQVFNSTQRLSHFGPQIPQMDRNIPTLQQLQLNHIFTPSLELPELTI
PHSSGQNGAVTFGTNMAGSCAQAPNNHMGSPQGITGRVHSNQSPPQFFTHNGLPATMAPN
GPQQISVPQSNHVAPSLVDGWASMIPSNAFVSPQIESSNLNLSNPLPTACLQGNSAPFQS
LKIQRVRQWPQNQQQLPPPASTIQNGIMPNGHKFIPDCHSQATETQRVPLTGLWPQNPNR
LYHQTQQGGLANGQPNPSSSCMFENISPPLPNGNSHVDGIRLAPTLSVCQSRMVDPQDQS
PPQGSCYFQWGPSEPVVGTSAVIQDNASTSPPSRPLVANITTPEGLLAMQQYLAGCSGVV
QTQILSLPVIDSNGIFSLPPLVNGSMCFTEHNQTNYCNF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacgctggagtctatgctgtcaaaaagcggaagaagcccgttcagaaaacc
aagaaaacccctgctccagaagtggtcaagtcgaacccttccaaacgccaccgggatcgg
ctgaacggggagctggacaggctgacgggcctcctaccattcccagaggatgtgtgctct
cgcctggacaaactctccgtgctccgcctcagcgttgggtacctgaaggtcaagagcttc
ttcaaagcgaccatgaagaaaaacagtgtcctgtttcccagtgagaatgggctgaacatt
aatgggatggaagccacaaacttctccaagggggacctactactccaggctctgaatggc
tttgtgctggtggtcacagctgaaggacatgtgttctatgcctctcctactatccaagac
tacctgggcttccatcagtcagatgtggtccaccagagtgtgtttgagctgatccacaca
gacgacagagcaatgttcagacgacagcttcactttgccctcaaccccaagccctttgac
ccagagcagggaggagacggcatggcaagcagcagtgacatcaccaggaacattgtgacc
tataaccctgagcagctccccccagagaactcctccttcctggagaggaactttgtgtgt
cgcttccgctgcctcctggacaactcttctggcttcctggctctgaacttccaggggcgt
ctcaagttcctccatgcccagagcatgctgggggatgacgggacacgcagccagcccaac
ctgggcctcttcaccatcgccacccctgtccagaacccgtccattttggagatcagatct
aagacaatcttcttccagaccaaacacaagctggacttcacccccgtgggtgttgatgcc
agggggaaggttgtcctgggctactcagagatggagttgtgtatgagaggctctggttat
cagttcatccatgcagctgatatgatgtactgcgcagacaaccatgtcagaatgattaag
acaggagagagtggtctgaccacattcagactacttcagaagaccggatgctgggtctgg
gtccaggccaatgccaggctcgtctacaaaggaggaaggcctgacttcatcatcgcacgc
cagagagctttgcttaattctgagggagaggagcatttacgccagaggaagatgcagctg
cccttcagcttcaccaccggggaggccctgctgtacgagaccggccccactctggatgca
actgagttccaaaccaactccccaaaaatccgcaaggtggggtctctggacccccagtct
ctgctgggctccttactgaagcaagacgagtccgtctacacccagccccaggagcctcag
ctacccatagaccaggcattcatggacagccgagcgctcaccaacgtggcctgtaactcc
tggcagagtagcatggagccccaggggcccgacggggatgatgatggtgacggtcccagt
gtggtgatgcagaagggggcggtggtggacatgatagacgccctggagaagatggcacga
gatggggacctgtgtgaggcgctgcaggggctggacgtggacgcggccgaactgatggag
tgggagagtgccctcctcaggctgagccaggaatccaacgggactgggggcggggatacc
tccccggagctggatgacatcatgaccaacgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagccaggagagcggtaaccagcccaactgctccattatggtcaacaac
aaccctaacctaaacctgttcacagaggtgtttaacaacaacaacaaccaggatggacca
ttcacaggaatggtcagccctacaggtgtcggacagtgcaagcccgggttgcttgacagc
cgcagctttatccataatggctccccagtgaacggtcaaattggtcaggtaacagacaat
ggaccagatgatttggcaggacagaaccaggcaggaccacaccaggtgttcaacagcacc
cagaggctctcccactttggcccccagatccctcagatggaccggaacatccccaccctg
cagcagctacagctcaaccacatcttcaccccctctctggagctccccgagctcactatc
ccacacagctcaggccagaacggggctgttacgtttggcaccaacatggctggatcctgt
gctcaggcaccaaacaaccacatgggaagccctcagggtatcactggccgagtccactct
aaccagtcacctccacagtttttcactcataatggcttgccagctacaatggcaccaaac
ggaccacagcagatctcggttccgcagtccaaccatgtagcacctagtctggtggatggc
tgggcatccatgattcccagtaatgcctttgtttcaccccagattgaatctagcaatctc
aatctatctaatccccttccgactgcttgccttcagggaaacagtgcaccatttcagtca
ctcaaaatccagagagttcggcagtggccccagaaccagcagcagttgccacccccagcc
agcacaatacagaatggaataatgccgaatggacacaaattcatccctgactgtcacagt
caagccacagagacccaacgagtccctctcacaggcctttggccacagaaccccaacaga
ctgtaccaccaaacccagcaggggggattggccaatggccagcctaatccatccagtagc
tgcatgtttgagaacatctcaccccccctccctaatggaaacagccacgtggatggcatc
aggctggcccccacgttgtctgtatgccagagtaggatggtggacccccaggaccagagt
cctccacagggctcttgctacttccagtggggccccagtgagccggtggtgggcacgtca
gccgtcatccaggacaacgccagcaccagccccccgtctcgcccgctggtggccaacata
accacccctgagggcctactggccatgcagcagtacctggctggatgcagcggagtcgta
cagacacagattctaagcctccctgttatagacagcaatggaatattctctttaccaccc
cttgtaaatggatccatgtgctttacagagcacaaccaaaccaactattgcaacttctaa
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