Salvelinus namaycush (lake trout): 120058724
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Entry
120058724 CDS
T07522
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00531
Glycosaminoglycan degradation
snh01100
Metabolic pathways
snh04142
Lysosome
Module
snh_M00076
Dermatan sulfate degradation
snh_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120058724 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120058724 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
snh02042
]
120058724 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120058724 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120058724 (si:dkey-72l14.3)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
120058724 (si:dkey-72l14.3)
Bacterial toxins [BR:
snh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
120058724 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Enzymes
120058724 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Enzymes
120058724 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
120058724
NCBI-ProteinID:
XP_038863395
UniProt:
A0A8U1BTU8
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All DBs
Position
Sna14:complement(35535900..35541796)
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AA seq
492 aa
AA seq
DB search
MSPVWKGEMLHPHLCHRTRLQLARTPLSPGQPFLVLWGIPNKACSGRPDPGAFGMEREGR
VSMFYEDTLGKYPYYTNQDQPVNGGLPQHTRLDGHLQKTGEDLAAALPSIGYQGLGVLRW
GQWSPQWGRNREKQGIYLEGSRALLRTFFPDWTTEEVEKWSQVDFEAASQSILMETLWEV
RRLRPKALWGVTPYPNCYNSGPAQLLSNYTGRCPAAEMALNDELLWLWKCCSALYPALTL
EKLQGGTSGARLYTSNQIREALRVASLAGAAYDLPVFPLVRSVYTSTNTFLSEVDLVNTI
GESAAMGAAGVVLWEKDQGVFSTRTQRACSELATFVREVLGLYAVNVTTAARLCGVSLCQ
GRGRCVRRKPESSAYLHLPPSNFVMTQRKVEGVQATGQLDPGNLEAWKRDFQCQWYESLE
GAATDEELPKDRAQGALPPTLNAPLSSELNQETRPTLALSDHSGPSLTAPLLPLLLVLAT
ALSLNTDLCLNL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagtatggaaaggtgagatgctacacccccacctgtgtcacaggactcgtctg
cagctggcacgcacccctctgtcaccagggcagccttttctagtactatggggaatcccc
aacaaggcgtgttctggacgacctgacccaggagcctttgggatggagagagagggccgc
gtgtccatgttttatgaggacactctggggaagtacccctattacactaaccaggaccag
ccggtgaacggaggccttccccaacacaccagactggatggacacctccagaagacaggg
gaggacctggcggcagcgctaccatccataggctaccagggcctgggggtactgcgttgg
ggccagtggtccccgcagtggggaaggaaccgtgagaaacagggcatctacctggagggc
tccagggctctgctgaggaccttcttccctgactggaccacggaggaggtggagaagtgg
tctcaggtggactttgaggcagcgtcccagtccatcctcatggagaccctgtgggaggtg
aggaggctccgccccaaggctctgtggggcgtgaccccgtaccccaactgttacaactcc
ggccccgcccagttgctgtccaattacacgggtcgctgtcccgccgccgagatggcattg
aacgacgagctgctgtggctctggaaatgctgctctgctctctaccccgccctcacacta
gagaagctgcagggtgggacctcaggggccagactgtacacgtccaatcagatccgagag
gcactgagagtggcaagcttggccggggccgcctacgaccttcctgtgttcccattggtc
aggagtgtctatacatcgaccaatacttttctgtctgaggtggacctggtcaacaccatt
ggtgagagtgctgccatgggggcagcaggggttgtcctctgggagaaagatcaaggtgtc
ttctctacaaggactcagagagcctgctcagagctggccacgtttgtgcgtgaggttctg
ggcctgtacgccgtcaacgtgaccacagccgcccgcctgtgcggcgtctccctgtgccag
gggcgtggccgctgcgtgcgccgcaaacccgagagctccgcctacctgcacttgccgccc
tccaacttcgtgatgacgcagaggaaggtggagggggtacaggccacaggccagctggac
cctggcaacctggaggcctggaagagggacttccagtgccagtggtatgagtccctggag
ggggcagccaccgacgaggagctccccaaggacagggcacagggagcccttccccccacc
ctgaatgcccccttgtcgagtgagctgaaccaagagaccaggcccaccctcgctctgtca
gaccacagcggaccatcactcacggcacctctcctccctctactgctggtattagccaca
gctctaagcctgaacacagacttatgcctgaacctctga
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