Salvelinus namaycush (lake trout): 120064084
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Entry
120064084 CDS
T07522
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03410
Base excision repair
snh04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120064084 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120064084 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120064084 (parp4)
03036 Chromosome and associated proteins [BR:
snh03036
]
120064084 (parp4)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120064084 (parp4)
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120064084 (parp4)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120064084 (parp4)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120064084 (parp4)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120064084 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
PTCB-BRCT
NPBW
CobT_C
Motif
Other DBs
NCBI-GeneID:
120064084
NCBI-ProteinID:
XP_038870357
UniProt:
A0A8U1H3U6
LinkDB
All DBs
Position
Sna19:complement(5175170..5199445)
Genome browser
AA seq
1951 aa
AA seq
DB search
MALFDNCFVVLELKNLPYKEKKRLKLAITENGGSISYVINKQCTLVVTSSMSSLSSSRVR
SMKKHQTPVVGVEYVSRCLEKEVLLPVEDYCLPPPPSTSLIPPRPASPLPSQSVLKGTSQ
PAEVQTQTVNAVNQAERAGNQESTYLGKFRVYTESDNDLPTYPTNFQVAKYSIFGKANSS
TWSVLELQSGSTEGGQQQFRVVRYWREDHGAKSAAVQDKQVFLSMSEEAVEVYQTLRKEL
QVRGLTLRTTLPPEAPDLGSAILHQLLLEEKLSCSSLSQEVGVFVELLWAEALGCLDNVL
KVPITSLSLNDVSRAEGLLLQVQRKLRVRQGEGPDTEVASLMEEVYTLLPHKTDLSHLPL
HTKLISSQLDLCQLIRDVLNVSEATLRSPIPSCLGKYRALRCSIERVPPGPEFLYVTELL
HDRQVQILQVLRVNRGVELQMFREELGNVKPLLHSSSPSSFVGILSRGLLLPRVGVEHHG
IERTDIGNLGGGIYFSDAMSTSLKYSKPSVTDGSRLLLVCDVALGRCTDLQKRDSSLTHS
PEGYHSVHGVRHTPKKPSEFDDDEYVVYSPEQVRLQYVVQFRLEEDQLKDFQPTIDTSST
ELPLPVSPSDLLSCGEDVGSCKNPLEEVTAGLLDCSGQPLPLQAVHVRARLMDLLSQVII
FQTYTNQSTAPIEAKYVFPLDDSAAVCGFEAFINGKHVMGQVKEKQQARKEYKQAIERGH
GAYLMDQDAPDVFTISVGNLPAGATVLIKVTFVTELVIMEGLINFSLPGSVAPWQQSSAL
NQRTQVTLEKVCVTNLDSQGEFSLDMSIEMPNEIINLHCLTHKVKIKRTDCKAVVRTCPG
ETLGPDGFLVCFSLAQIHLPRMWVEKHPDKDSQACMLVFYPDFEPCPTSSPMSGSSEVIL
LLDSSESMRGEALQNARRIALQLLNTLDHHSIRVNVISFGSDQKDAFLSANPLVEALQPA
KKFIMSSPPVGGSTELWRPLRSLSLLPPSQGVRNLLLLSDGHVQNQALTLQLVRQHAQHS
RLFTCGLSPTANRHMLRALAQAGGGAYEFFDTKTKHTWREKVACQVKRIVSPGCSSVSVK
WQQFNPSAPPPVQAPSQLHALFTDCHTLVYGFVPHCTQATLLGDLSGQNIETMVSTTELQ
KTRGTFLHKLTARAVIRDYEDGSLHTNEAEHEGKKSVMKSFIIELSKEFSILSQFTSFVA
IEERDSEQPDVGFTDVPKLISDEDVDFLPYLSWQEEEYERDGMDLGSDSMSNLLDGGPGH
VLCRNICLGGMGEEHESMVQLQMDDESWEGSVNWNLHSKSLNQSATDEVPLGSSSYLMGS
MVFASPVTVSEPLDMTLQSEGAVTVEDLECFDDMDFGFQESEHPLHGSVIMHSEALSSSY
SPTRHTIAGSQCIPVTPYLATTMLARTVETDFIPELSETFQSLPKIVRHAKSRQVDFRRA
DRHRKVCAGPAFDPVETQKKSLSVADVPRTEEQREEDKSHVFAYGLSPPFRASVLSSPGP
PPSRLQSFSAAVSDALPPPPPASVLSSPGPPPFRLQSFSAAVSDALPPPSALVSNEFRAI
RYEMGVHPRPGVGAISHTATFPKLRAGGDLLLSKPREPYPVELPMCETSKMWTVDNSLSE
DKDCGLVEMDHWQPSVVPASVPPSGFGFGGGRAGSQSSQPHGSLFGATASACYIPGLYEA
SSAGGPPLCSLFGLTPTLPGGSARSMGLSFEAPLTGGHLNSLLPTTHGAYLTQSLGALVG
SSQFGSSLRTLHQHHVLPQAQKPLDIKENIQKLVGDRERRGGLEFRKNTLDVVKWTEIFA
LQHSEGYWECSASLGSLLGVDVDYFANVFLKNRGISSLGVRAHADILRLVASLLVLQLMR
VRRLEEGKLLLSLFRLDLDHSPPQPRCERWEAVRRAVDWVCWADREYPCVCSRLEFGWDW
ESSTRRLLGIDPPHPLSPLIILGSTGGVRAQ
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttgacaactgttttgtggttttggagctgaagaatttgccttataaggag
aagaagaggctgaagctggcaataacagagaatgggggcagcatttcctatgtgatcaat
aagcagtgtactctcgtagtgacgagcagtatgtccagtctgagctccagtagggtgcgg
agcatgaagaagcatcagactccagtagtaggggtggagtatgtgtcacgctgcctggag
aaggaagtcctgctgcctgtagaggactactgcctgcccccccctccctctacctctctc
atcccacccaggcctgcctctcccttgccatctcagtcagtgttgaaggggacgagccag
ccggctgaagttcagacccagacagtgaatgctgtaaatcaagccgagagggcggggaat
caggagagtacttacctgggcaaattcagagtgtatactgaaagtgacaatgatcttcca
acatatccaacaaatttccaagtggccaaatactcaatttttggaaaggctaacagcagc
acatggtcggtgttggagctgcagagtggcagcacagaggggggacagcagcagttccgt
gtggtgaggtactggagagaggaccatggtgctaagtcagcagctgtgcaggacaagcag
gtgttcctctccatgtcagaggaggctgtggaggtctaccagactctcaggaaggagctg
caggtcagaggactcacactgaggaccaccctccctccagaggctccggatctgggctct
gccatcctgcatcagctgctgctggaggagaagctgagttgcagcagcctatcacaggaa
gtgggcgtgttcgtggagctgctctgggcagaggcccttggttgtctggacaatgtcctc
aaggttccaatcaccagcctcagtctcaacgatgtgagcagggctgaggggctgctgcta
caggtccagaggaagctgagggtgagacagggggaggggccagacactgaggtggcttct
ctgatggaggaggtctacaccctcctgccacacaaaactgatctgtcccatctccctctc
cacactaaactcatctcatcgcaactggacctctgccagttgatcagagacgtgctgaat
gtgagcgaggcaacactgagaagccccatcccttcctgtctggggaagtaccgcgccctg
aggtgcagcattgaaagagttccccctggtcctgaatttctgtatgtcactgaacttcta
cacgacagacaggtgcagatcttgcaggtgctgagagtaaacagaggggtagagctacag
atgtttagggaggagctggggaacgttaagcccctcctccactcctccagccctagcagc
tttgtggggatcctgtctcggggtctgttgctgcccagagttggagtggagcatcatggg
attgagagaacagacattgggaacttgggcggtggcatctacttcagtgatgcaatgagt
accagtttgaagtactctaagcccagtgtgacggacggcagtcggttgctgctggtgtgt
gacgtggcgttggggcgctgtactgacctccaaaagagggacagcagcctgactcactcc
cctgagggataccacagtgtacacggggttcgccacacccccaagaaaccctcagagttt
gacgatgatgagtatgtggtgtacagcccggagcaggtgaggctgcaatatgtggtacag
ttcagactggaggaggaccagctgaaggacttccagcccaccatagatacttcttctacc
gagcttccgcttcctgtctctccgtctgacctcttgtcctgtggtgaggatgttgggagt
tgtaagaaccctctagaggaggtgactgcaggcctgttggactgctctggacaaccactc
cccctacaggccgttcatgtcagggccaggctgatggatctgctctcccaggtcatcatc
ttccagacatacaccaatcagagcaccgcccccattgaagccaagtacgtcttcccattg
gatgattctgctgctgtgtgtggctttgaggccttcatcaatgggaaacatgtaatggga
caggtgaaggagaagcagcaggcgcgtaaagagtataaacaggccatagagagaggccat
ggagcttacctaatggaccaggatgcacctgatgttttcaccatcagcgttgggaacctg
ccggccggtgccaccgtccttatcaaagttaccttcgtcaccgagctggtcatcatggag
ggcttgatcaacttctcgttgcccggtagtgtggcgccatggcaacagagctcagcgctc
aaccagaggactcaggtgactttggaaaaggtgtgtgtgaccaacctggattcccaaggg
gagttcagtctggacatgtccattgagatgcccaatgagatcatcaacctgcactgtctc
acacacaaagtcaagatcaagaggaccgactgtaaggcggtggtgaggacatgtccaggt
gagactctgggtccagatgggttcctggtctgcttcagtctggctcagatccacctaccc
aggatgtgggtggagaaacacccagataaagacagccaggcctgtatgttggtattttac
ccagactttgagccctgccccacctccagccccatgtccggctccagtgaggttatcctg
ctgttggactcatctgagtccatgagaggagaagctctccagaacgccaggagaatcgcc
ctgcagcttcttaataccctggaccaccacagcattcgagtcaacgtcatctcctttggc
tcagaccagaaggatgcttttctctctgccaaccctctagtcgaggccctccaaccagcc
aagaagttcatcatgtcctccccacctgttgggggcagcactgagctgtggaggcccctg
cgcagcctgagtctgttgcctccgtcgcagggcgtgaggaacctgctgctgctatcagac
ggtcacgtccagaaccaagccctaaccctgcagctggtcagacagcatgcccagcacagc
cgcctcttcacctgcggcctcagcccaacagctaatcggcacatgttgcgggccctggcc
caggcaggggggggggcctatgagttctttgacacaaagacaaagcacacctggcgagag
aaggtggcgtgccaggtgaagcgcatcgtgtctccaggctgcagctctgtgtctgtgaag
tggcagcagtttaacccctcagctccccctcctgtccaggccccctctcagctccacgca
ctcttcactgactgccacaccctggtctacggcttcgtgccacactgtacacaggccact
cttcttggagacctgagtggtcagaacattgagacaatggtgtccaccactgagctacag
aaaaccaggggcacgttccttcataagctcacagcgagggccgttatcagagactatgag
gatggcagtcttcacaccaacgaggctgaacacgaggggaagaaatccgtaatgaagtcc
ttcatcattgagctgagcaaagagttctccatcctgtctcagttcaccagctttgttgcc
atcgaggagagggactcagagcagcctgacgtgggcttcacagacgttcccaaactgatc
tcagacgaagacgtcgacttcttaccttaccttagctggcaggaggaggaatatgagaga
gatgggatggacttgggatcagactcaatgtcaaacttgttggatggtgggccagggcat
gttttatgcagaaatatctgtctaggggggatgggggaggagcatgaatcgatggttcaa
ctccagatggatgacgaatcatgggaaggatctgtgaattggaacttacattccaaatct
ctaaatcagagtgctacggatgaggtgcctcttggtagttcctcttacttaatgggctct
atggtctttgccagcccagtgaccgtgtccgaacctctagatatgactttgcagagtgaa
ggagctgtgacggttgaagacttggagtgctttgatgacatggactttggttttcaggaa
tctgaacacccccttcatggctcagtaatcatgcatagtgaggctctgtcctcttcttac
tctccaactcgccacacgattgcaggtagccaatgcataccagtcaccccataccttgct
accaccatgctggctagaactgtggagacggatttcatccctgagctgtctgagaccttc
cagtctctcccaaagatagtgaggcatgcgaagagtagacaggtagactttagacgggcg
gacagacacaggaaggtttgtgccggtccggcatttgaccctgtagagacacagaagaag
tctctctctgttgctgatgtgcctcgaactgaagaacagagggaggaggacaagtctcac
gtttttgcttatggtctttctcctccattccgtgcttctgtcctcagttctcctggtcct
cctccatctcgactgcagtctttctctgccgcagtttcagatgctcttcctcctccaccc
cctgcttctgtcctcagttctcctggtcctcctccatttcgactgcagtctttctctgcc
gcagtttcagatgctcttcctcctccctctgctcttgtctccaatgagtttcgagcgatt
agatacgagatgggagttcatcccagacctggagttggggctatctcccatactgctacc
ttcccgaaactgcgagccggtggggacctgctactttccaaaccccgagagccctatcct
gtggaactgccaatgtgtgagactagcaaaatgtggaccgtggataatagcttatctgag
gataaggattgtggactagtggagatggaccactggcaaccttctgttgtccctgcctct
gtgcccccatcagggtttggtttcgggggcggaagggcagggtctcaaagcagccaacct
cacggctctttgtttggggccacagccagtgcatgttacattccaggtttatatgaggct
tcttcagcaggcggaccacctctgtgctcgctgtttggcctcacacccactcttcctgga
ggctcagccagatcaatggggttaagttttgaggcaccacttactggcggacacctcaac
tcccttttacccaccactcatggcgcctatctgacccaatctttaggggccttagttgga
tcctctcagtttggtagctctcttaggacactacaccaacatcatgtactaccacaagca
cagaaacctctggatataaaagaaaacatacaaaaacttgtcggagaccgtgaaaggagg
ggaggtcttgaattcaggaagaatactcttgatgtagtaaaatggacagagatttttgcc
ctccagcactcggaaggttactgggagtgctctgccagcctgggttccctcctcggtgtg
gatgtggactactttgcaaacgtcttcctgaagaatagaggcatcagctctctaggtgtg
agggcacatgctgacatcctgaggctggtggccagtttgctggtgctgcagctgatgagg
gtgaggaggctagaggagggtaagctgctgctcagcctgttccgtctggacctggaccac
tctcctcctcagcccaggtgtgagcgctgggaggcggtgaggagggcggtggactgggtg
tgttgggcagacagggagtacccgtgtgtgtgcagcaggctggagtttggctgggactgg
gagtcatccacacggcggctcctgggcatcgaccccccacaccccctctctcccctcatc
atcctcgggtccacagggggagtgagggcccaatga
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integrated database retrieval system
