Salvelinus namaycush (lake trout): 120064180
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Entry
120064180 CDS
T07522
Name
(RefSeq) cystathionine beta-synthase-like isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00260
Glycine, serine and threonine metabolism
snh00270
Cysteine and methionine metabolism
snh01100
Metabolic pathways
snh01230
Biosynthesis of amino acids
Module
snh_M00035
Methionine degradation
snh_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120064180
00270 Cysteine and methionine metabolism
120064180
Enzymes [BR:
snh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
120064180
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
120064180
NCBI-ProteinID:
XP_038870499
UniProt:
A0A8U1F6M0
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Position
Sna19:15575846..15603866
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AA seq
625 aa
AA seq
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MSSVLSSTDSVGAEPSVCPNAAKLSNTQAKGVADILKGGCKVNGEAMLNGHKLSINGSAQ
VNGDSAGHKAQIGSVHVNGHEGKNDLEKAAAGVQERQWIRPDLPSKCTWKLGGSSVDSPH
CHSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVEDAERNGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTAARFDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEKLNKTDKTQYEVEG
IGYDFIPTVLDRSVIDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTPEDQMVSKPWWWNLSLQGLDLFSPLTV
LPSVNIKKTIKILKEKAFDQAPVVDESGVILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLTDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDMLNYITT
RERQGSTRERTLSECSMTSECSQTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttctctccagcacagactctgtgggcgccgagccctccgtctgccccaac
gcagccaagctcagcaacacgcaagccaaaggagtggctgacattttgaaaggggggtgc
aaggtcaatggagaagccatgttgaacggccacaagctctccattaatggatcggctcaa
gtgaacggggacagtgctggccataaggcccagattgggtcggtccatgtgaacgggcac
gaggggaagaacgatctagagaaggcagccgcaggcgtgcaggagaggcagtggatccgt
cctgacttgcccagcaaatgcacttggaaactgggcgggtcttctgtagattcccctcac
tgccactctgaactgactgaagcccccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagcctttggccttaagtgtgaactc
ttggccaagtgtgagttctttaacgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggaggatgcagagagaaatgggatcctcaaaccaggagacaccatcatcgagccc
acctctggcaacacaggtattggtctagccctggcctctgcagttaaaggctatcgctgc
atcattgtcatgcctgagaagatgagcatggagaaggtggatgtgcttagagccttgggg
gcggagatcgtgcgtaccccaaccgccgcccgctttgattcgccggaatcccacgtgggc
gtggcctggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaggagatcctggagcagtgcgat
ggtaaggtggacatgttggtggcaggagctggcacaggtggcaccatcactggtatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagagaagctgaacaaaaccgataagacccagtacgaggtggagggc
atcggatacgacttcatccctactgtactagacagatctgtaattgacaggtggtataag
tccaatgacgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggcacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgacaactggatgtgtgataagggcttcctaaccccagaagaccagatggtgtcc
aaaccctggtggtggaacctgagtctgcagggtctggacctattttcccccctcactgtg
ctgccttcagtcaacatcaagaagaccatcaagatcctcaaggagaaggccttcgaccag
gcacccgtcgttgacgagtccggcgtgatcctagggatggttaccctgggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caattcaaacaggtgcgactgaccgataacttgggaaagctgtcccgtatcctggagaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgacggccattgacatgcttaattacatcaccacg
cgcgagaggcagggaagcacacgcgagcgcaccctgtcagagtgctcaatgacgtcagag
tgctcgcagaccgactag
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