Salvelinus namaycush (lake trout): 120065511
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Entry
120065511 CDS
T07522
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
snh03013
Nucleocytoplasmic transport
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120065511 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
120065511 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120065511 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120065511 (xpo1a)
03009 Ribosome biogenesis [BR:
snh03009
]
120065511 (xpo1a)
03016 Transfer RNA biogenesis [BR:
snh03016
]
120065511 (xpo1a)
03036 Chromosome and associated proteins [BR:
snh03036
]
120065511 (xpo1a)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120065511 (xpo1a)
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120065511 (xpo1a)
Pre-60S particles
120065511 (xpo1a)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120065511 (xpo1a)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120065511 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
120065511
NCBI-ProteinID:
XP_038872500
UniProt:
A0A8U1FAL9
LinkDB
All DBs
Position
Sna2:complement(61987039..62002164)
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
TLNPASQHNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatctgctggacaatgtagtcaattctatgtactatgacattgga
tcacagcaacgcatggcacaggaggtgctgaccaacctgaaggatcacccggacgcatgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcactg
caaattctggagactgtgatcaaaacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcgtctgacgccgcaaatgtt
gagaaagatggagtgtacattgctaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaaacactggcccaccttcatcagtgacatcgtgggtgccagccgcaccagc
gagagcctgtgtcagaacaacatgatcatcctcaagctgctcagtgaggaagtctttgac
ttctccagtggacagatgacccaggtcaaggccaagcacctgaaggacagcatgtgcaat
gaattctcgcaaatattccagctctgccagtttgtcatggaaaactcccagaatgcccct
ctggtccaagccacactcgagactctcctgcgcttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagcgtcaaccagtacgag
gagcagtttgtcaacctcttcacgctcaccatgtgtcagctcaaacagatgctccccctg
aacaccaatatccgcctggcatattccaacggcaaggacgatgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcacggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctctccactacatgctgctagtgtctgaggtg
gaggagacggagatctttaagatttgtctggagtactggaaccacttggcggccgagctc
tacagggagagtcccttctctacctccacctcccccttgctctctgggagccagcacttt
gacgtgcccccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctgatg
gtgagccgaatggccaagccagaggaggtgctggtggtggagaatgaccagggagaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtctacctgacccatttggactatgcggacacagagcgcatcatgacagagaagctg
cacaaccaggtcaacgggacagagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcaccgtc
atcaaggacctgctgggcctttgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacattgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgtcgtcaacaagctctttgagttcatgcacgagactcacgacggcgtg
caggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgccactttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgatgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccaacaggtgcacacgttctacgaggcggtgggctacatg
atcggggcccagacggaccaggccgtgcaggagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagacggtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacacccttttgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggctgtactcatcgactaccagcgcaacgtccccgccgccagagagcccgaggtg
ctcagcaccatggcgaccatcgtcaacaagctgggcggacacatcaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagattttgaggag
tacccagagcataggacccatttcttctacctcctccaagcggtgaactcgcagtgcttc
ccggccttcctctccattcccccggcccagtttaaactggttctggactccattatctgg
gccttcaaacacaccatgaggaacgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaagctgccgcacagagcttctaccagacctacttctgt
gacatcctccagcacatcttctccgtcgtcacagatacctcacacacagcagggctaacc
atgcacgcgtccatcctggcgtacatgttcaacctggtggaggagggtaaaatcagcacc
accctcaacccagccagccagcacaaccagggctacgttcaggagtacgtggccaacctg
ctcaagacggccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtctg
ttcagcttgaaccaggacatccctgctttcaaggagcacctgagggacttcctggtgcag
atcaaggagtttgctggtgaggacaccacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaggagaaacacaagctacagatgtccgttcccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactaa
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integrated database retrieval system
