Streptococcus pneumoniae INV104 (serotype 1): INV104_04210
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Entry
INV104_04210 CDS
T02072
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sni
Streptococcus pneumoniae INV104 (serotype 1)
Pathway
sni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
INV104_04210 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sni03021
]
INV104_04210 (rpoE)
03400 DNA repair and recombination proteins [BR:
sni03400
]
INV104_04210 (rpoE)
Transcription machinery [BR:
sni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
INV104_04210 (rpoE)
DNA repair and recombination proteins [BR:
sni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
INV104_04210 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CBW36105
LinkDB
All DBs
Position
467697..468284
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AA seq
195 aa
AA seq
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MELEVFAGQEKSELSMIEVARAILELRGRDHEMHFSDLVNEIQNYLGTSNSDIREALPLF
YTELNFDGSFISLGDNKWGLRSWYGVDEIDEEIIALEENDDDEVAPKAKKKRVNAFMDGD
SDAIDYNADDPEDEDAYEADPALSYDDENPDDEKNEVEAYDAEINEIAPDDLGEDVDLNE
DDDEFSDDDAETSEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctgggcaagaaaaaagtgaactatctatgattgaggtagcg
cgtgctatattagaacttcgtggtcgcgatcatgagatgcattttagcgatcttgtaaac
gaaattcaaaactaccttggaacatcaaacagcgatatccgcgaagctttgcctctgttc
tacacagagttgaactttgacggtagcttcatctcacttggggacaacaaatggggtctt
cgttcatggtatggtgtggacgaaatcgacgaagaaatcatcgctcttgaagaaaatgac
gacgatgaagtagcaccaaaagctaagaaaaaacgtgtcaatgcctttatggatggtgat
tcagatgccattgactacaatgcagatgatccagaagacgaagatgcatacgaagcagat
ccagctctttcatacgatgatgaaaatccagatgatgaaaaaaatgaagtggaagcttat
gatgcagaaatcaacgaaatcgctccagatgacttgggagaagatgtggatctcaacgaa
gacgacgacgagttttcagatgacgacgctgaaaccagcgaggaataa
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