Sphingomonas sp. NIC1: A7E77_00955
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Entry
A7E77_00955 CDS
T04479
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
snj
Sphingomonas sp. NIC1
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snj03009
]
A7E77_00955
Enzymes [BR:
snj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A7E77_00955
Ribosome biogenesis [BR:
snj03009
]
Prokaryotic type
ribosomal protein modification factors
A7E77_00955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ANC85589
LinkDB
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Position
178237..179562
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AA seq
441 aa
AA seq
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MATRLPSPPRVGMVSLGCPKNLVDSERILTQLRADGYQMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEVIRARFPQVLAVTGAHQYEQVVEAVHEAAPA
NLSPYIDLIPDAGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LVAAGTRELLVISQDTSAYGIDIRKEPRMWKGREVVPHMTDLARELGQIAPWVRLHYVYP
YPHVDQVIPLMAEGLVLPYLDIPFQHAAPSVLKAMKRPGNDAKVLQRIHQWRDICPDIAI
RSTFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDPVPEEVKEERY
QRIMEKTAAISAAKLAAKVGRTLPVIIDEVGEEGATGRSQADAPEIDGQVFLRDAAHLSV
GDIVPVTIEDADEHDLYGVPA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcgtcttccttctccgccgcgcgtcggcatggtgtcgctcggctgtcccaag
aatctggtcgacagcgaacgcatcctcacccagctgcgtgccgacggctatcagatgtcc
gccgattatgccggcgccgacgtcgtgctggtcaacacctgcggcttcctcgattccgcc
aaggaagaaagccttgaggcgatcggcgaagcgatcgcggaaaacggccgcgtgatcgtg
acgggctgcatggggaaagaggcggaggtcattcgcgcccgcttcccgcaggtgctcgcc
gtcaccggcgcgcatcaatacgaacaggtggtcgaggcggtgcatgaggcggcgcctgcg
aacctgtcgccctatatcgacctcatccccgacgccgggctgaagctgacgccgcgccac
tacagctatctgaagatttcggaaggttgcaaccaccgctgctccttctgcatcattcca
tccctgcgcggcgacctcgtcagccgccgccccgacgccatcctgcgcgaggcggagaaa
ctggtcgccgccggcacgcgagaattgctcgtcatcagccaggacaccagcgcctacggc
atcgacatccgcaaggaaccgcggatgtggaaggggcgcgaggtcgtgccgcacatgacc
gatctcgcccgcgaactcggccagatcgcgccttgggtgcggctgcactacgtctaccct
tatccgcatgtcgatcaggtcattccgctgatggcggaagggctcgtgctcccctatctc
gacatcccgttccagcatgccgcgccgtcggtgctgaaagcgatgaagcgcccgggcaac
gacgccaaggtgttgcagcgtatccaccagtggcgggacatctgcccggacatcgcgatc
cgatcgaccttcgtcgtcggcttccccggcgagaccgaagccgacttccagtatctgctc
gactggctggatgaggcacagctcgatcgcgtcggcgcgttccgcttcgagccggtggag
ggcgccgccgccaatgcgctgcccgatccggtgccggaggaggtcaaggaagagcgctat
cagcggatcatggaaaagaccgccgcgatcagcgccgcaaagctcgccgccaaggtcggt
cgcaccctgcccgtcatcatcgacgaggtcggcgaggaaggcgcgacgggccgcagccag
gccgatgcgcccgaaatcgacggtcaggtcttcctgcgcgacgccgcccatctgtcggtc
ggcgatatcgtaccggtcacgatcgaggacgccgacgaacacgacctgtacggcgtgccg
gcgtaa
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