Streptomyces nitrosporeus: CP967_07870
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Entry
CP967_07870 CDS
T06889
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
snk
Streptomyces nitrosporeus
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snk03009
]
CP967_07870 (rimO)
Enzymes [BR:
snk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP967_07870 (rimO)
Ribosome biogenesis [BR:
snk03009
]
Prokaryotic type
ribosomal protein modification factors
CP967_07870 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEU71894
UniProt:
A0A5J6F8I8
LinkDB
All DBs
Position
complement(1842647..1844125)
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AA seq
492 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWDLVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKEHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
GGGIHASHTPRDRRKLLPISPAERQDAAVALPGHAQEITPAPADLPEGIAPVSGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPGVLRAMRRFGDTDRFLELLDTIRGKAPQAGARSNFIVGFPGETEEDLAELE
RFLTGARLDAIGVFGYSDEEGTEAVGYENKLDADVIAERLAHISRLAEELTSQRAEERVG
ETLQVLVESVESEDDGPVAVGRAAHQAPETDGQVVFTAREGLVPGRMVEAKAVGSEGVDL
VAEHHQLVEAAR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggatctcgtcgaggacgcctcg
gacgcggatgtcgccgtcgtcaacacctgtgggttcgtcgaagccgccaagaaggactcg
gtcgacgccctgctcgaagccaacgatctcaaggagcacggcagaacccaggccgtggtc
gccgtcggctgcatggccgaacgctacggcaaggacctcgccgaggcgctgcccgaagcg
gacggggtcctcggcttcgacgactacgccgacatctccgaccgcctgcagacgatcctc
ggcggcggtatccacgcctcccacaccccgcgggaccgccgcaagctgctgccgatcagc
ccggccgagcggcaggacgccgccgtcgcgctgcccggacacgcgcaggagatcacgccc
gccccggccgacctccccgagggcatcgccccggtctccggtccgcgggcaccgctgcgc
cgccggctgggcaccagcccggtcgcctcggtgaagctcgcctccggctgcgaccgccgc
tgctcgttctgcgcgatcccctccttccgcggctccttcatctcccggcgcccctcggac
gtcctgggggagacgcgctggctcgccgagcagggcgtcaaggaggtcatgctggtctcc
gagaacaacacgtcctacggcaaggacctcggcgacatcaggctgctggagaccctgctc
cccgagctcgccgaggtcgacgggatcgagcggatccgcgtcagctacctccagcccgcc
gagatgcgccccgggctcatcgacgtgctcacctccacgccgaaggtcgcgccgtacttc
gacctctccttccagcactccgcccccggcgtgctgcgggcgatgcggcggttcggtgac
acggaccgcttcctggagctgctggacaccatccggggcaaggccccgcaggcgggcgcc
cgctcgaacttcatcgtgggcttcccgggcgagaccgaggaggacctcgccgaactggag
cgcttcctcacaggtgcccggctggacgccatcggggtgttcggctactccgacgaggaa
ggcaccgaagccgtcggctacgagaacaagctggacgccgacgtgatcgccgagcggctc
gcgcacatctcgcggctggccgaggaactcacctcgcagcgcgcggaggagcgcgtcggg
gagaccctccaggtcctcgtcgagtccgtggagtccgaggacgacggcccggtcgcggtg
ggccgcgccgcccaccaggcgccggaaacggacggccaggtcgtcttcaccgcacgcgag
ggtctggtgcccggccgtatggtcgaagcgaaggcagtgggctccgagggagtggacctc
gtggccgaacaccaccagctcgtggaggcagccagatga
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