Staphylococcus nepalensis: BJD96_05800
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Entry
BJD96_05800 CDS
T05272
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
snl
Staphylococcus nepalensis
Pathway
snl00730
Thiamine metabolism
snl01100
Metabolic pathways
snl01240
Biosynthesis of cofactors
snl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BJD96_05800
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BJD96_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snl03016
]
BJD96_05800
Enzymes [BR:
snl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BJD96_05800
Transfer RNA biogenesis [BR:
snl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BJD96_05800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ATH59843
UniProt:
A0A291JK21
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All DBs
Position
1238337..1239560
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AA seq
407 aa
AA seq
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MIYDHILVRYGELTLKGANRKMFVNKLRANVKRALMPLQGYKVKANRDRMYIELYEGADI
DEMCRRLEKVFGIYSISPVLKIEKTVEAVRDIAVKFARDYESDDTFKIDVKRSDKNFSYD
TYQLQKDIGGAVLNATDHLTVDVHHPDHTIKVEVRLDAIYVYDKVISGSGGLPVGTGGKT
LLMLSGGIDSPVAGIEVMRRGVTVEAIHFHSPPFTSEKAKDKVIELTRIMSTHVGPIKLH
IVPFTNLQKQINKEVHERYTMTSTRRMMMRVADKLVHEIGAHAIVNGENLGQVASQTLKS
MYAINRVTSTPVLRPLLTLDKEDIVKKSKDIGTFDVSIQPFEDCCTIFTPKNPVTEPDIE
KVEKFESVYDFEPLVQEAFEQIETLTITPDYQSDKDSETQALADNLF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatttatgatcacatattagtgagatatggcgaactaacattaaaaggcgctaaccga
aagatgtttgttaataaattgcgtgcaaatgttaaacgtgctttaatgccgttgcaaggt
tataaagttaaagcgaatagagatagaatgtacattgaattatacgaaggggcagatata
gatgaaatgtgtcgtagactggaaaaagtattcggtatatattctataagccctgtgttg
aaaattgagaaaacagtggaagcggtacgtgatattgctgtgaaatttgctcgagattac
gaaagtgacgatacgtttaaaattgacgtcaaacgttcagataaaaacttttcatatgat
acgtatcaattgcaaaaggatattggtggtgcagtgttaaatgcgacagaccatttaacg
gtggatgtacatcaccctgatcatacaattaaagtagaagtacgtttagatgcgatttat
gtttatgataaagtgatttctggttcaggcggtctaccagttggtacaggcggcaagacg
ttattgatgttatcgggtggcattgattctccggtagcaggtattgaggttatgagaaga
ggggtcactgtcgaagcaattcactttcatagcccaccattcacaagtgaaaaagcgaaa
gataaagtgattgaattaacacgaattatgtcgacacacgttggccctatcaaattacac
attgtgccatttactaacttacaaaaacaaattaataaagaagtccatgaacgatatacg
atgacttcaacgcgacgtatgatgatgcgtgttgcagataaacttgtgcatgagattggc
gcacatgccattgtaaatggggaaaatttaggacaggttgcgagccaaacattaaaaagt
atgtacgcaattaatcgtgtgacatcaacgccagtattacgtccgctattaactctagac
aaagaagatattgtcaaaaaatctaaagatatcggtacgtttgatgtttctattcagcca
tttgaagattgttgcacaattttcacacccaaaaaccctgtaacagaaccagatattgaa
aaagtagaaaaatttgaaagcgtctatgattttgaacctttagtgcaagaagcgtttgaa
caaattgaaactttaacaatcacaccagattatcaaagtgacaaagattctgaaacacaa
gcactagcagataatttattctaa
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