Streptomyces nodosus: CP978_06480
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Entry
CP978_06480 CDS
T06839
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
snq
Streptomyces nodosus
Pathway
snq00260
Glycine, serine and threonine metabolism
snq00630
Glyoxylate and dicarboxylate metabolism
snq00785
Lipoic acid metabolism
snq01100
Metabolic pathways
snq01110
Biosynthesis of secondary metabolites
snq01200
Carbon metabolism
Module
snq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CP978_06480 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CP978_06480 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CP978_06480 (gcvP)
Enzymes [BR:
snq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CP978_06480 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF697
Motif
Other DBs
NCBI-ProteinID:
QEV38234
UniProt:
A0A0B5D898
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All DBs
Position
complement(1432466..1435351)
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AA seq
961 aa
AA seq
DB search
MTAHRIPLSELERGTPFEQRHIGPDQEARAKMLAQVGYGSLDELTAAAVPDVIKNADALD
LPGARTEPEVLAELRSLAGRNQVVDSMIGLGYHGTFTPPVILRNVLENPAWYTAYTPYQP
EISQGRLEALLNFQTMVADLTGLPTSGASLLDEGTAAAEAMALSRRMGKNKKGLFLVDAD
ALPQTVAVIRTRAEPTGVEVVVADLAEGIPAGIAEREINGVLIQYPGASGAVRDIKPVIE
QAHGLGAVVTVAADLLALTLLASPGGLGADIAIGTTQRFGVPMGFGGPHAGYMAVHEKFA
RSLPGRLVGVSVDADGHKAYRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVHHGP
EGLRTIARRTHRYAAVLAAGLTAGGVEVVHGAYFDTLTARVPGRAAEVVAAALERGVNLR
PVDADQVSIACDETTGRAQLDAVWAAFGVEGEVEALDASTEDALPQSLLRTGDYLTHPVF
HQHRSETAMLRYLRRLSDRDYALDRGMIPLGSCTMKLNATTEMEPITWPEFGQIHPFAPV
GQAEGYLTLIHELEERLAEVTGYDNVSLQPNAGSQGELAGLLAVRGYHRANGDEQRTVCL
IPSSAHGTNAASAVMAGMKVVVVKTAEDGEIDVEDLRAKIEQYRDELAVLMITYPSTHGV
FEEHVADICAAVHDAGGQVYVDGANLNALVGLAKPGRFGGDVSHLNLHKTFCIPHGGGGP
GVGPVGVRAHLAPYLPNHPLQPEAGPETGPGPVSAAPWGSAGILPISWAYVRLMGGEGLK
RATQVAVLSANYIAKRLEPHYPVLYTGPAGLVAHECIVDLRALTKETGVTVDDVAKRLID
YGFHAPTMSFPVAGTLMIEPTESEDLTEIDRFCDAMIAIRAEIEKVGSGEWPADDNPLRN
APHTAAALGGAWEHAYTREEAVFPAGVPAADKYWPPVRRIDQAFGDRNLVCSCPPMDAYQ
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccatcgcattccgctctccgagctcgaacggggcacacctttcgagcagcgc
catatcgggccggaccaggaggcgcgggccaagatgctcgcgcaggtcggctacggctcg
ctcgacgagctcacggccgcagccgtccccgatgtgatcaagaacgccgacgcgctggac
ctgcccggtgcgcgcaccgagcccgaggtgctcgccgagctgcgttcgctcgccggccgc
aaccaggtcgtggactccatgatcggtctcggctaccacggcaccttcacgccgccggtg
atcctgcggaacgtgctggagaacccggcctggtacaccgcgtacacgccctaccagccg
gagatctcccagggtcgtctggaggccctgctcaacttccagaccatggtcgccgacctc
accggcctgccgacctccggcgcgtccctgctcgacgagggcacggccgccgccgaggcg
atggcgctgtcccggcgcatgggcaagaacaagaagggcctcttcctggtcgatgcggac
gcgctgccgcagaccgtcgccgtgatccggacccgtgccgaacccacgggcgtcgaggtg
gtcgtcgccgacctcgccgagggcatccccgccgggatcgccgagcgcgagatcaacggt
gtgctcatccagtacccgggcgcctccggtgccgtgcgggacatcaagccggtcatcgag
caggcgcacgggctgggcgcggtggtcaccgtcgccgccgacctgctggcgctgaccctg
ctggcctcgcccggtgggctgggcgccgatatcgcgatcggtacgacgcagcgcttcggc
gtgccgatgggcttcggcggcccgcatgccggctacatggcggtgcacgagaagttcgcc
cgcagcctgcccggccggctggtgggcgtctcggtggacgcggacggccacaaggcctac
cggctcgccctgcagacgcgggagcagcacatccgccgcgagaaggccaccagcaacatc
tgcaccgcccaggtgctgctcgccgtgatggccggtatgtacgccgtccaccacggcccg
gaggggctgcggaccattgcgcggcgcacccaccgctatgccgcggtcctcgccgccggt
ctcaccgcgggcggggtcgaggtcgtccacggcgcctacttcgacaccctcaccgcgcgg
gtgcccgggcgggccgccgaggtggtcgccgccgccctcgagcggggcgtcaatctgcgt
ccggtcgacgccgaccaggtctcgatcgcctgcgacgagacgaccgggcgggcccagctg
gatgccgtatgggccgcgttcggcgtcgagggcgaggtcgaggcgctggacgcgagcacc
gaggacgcgctcccgcagtcgctgctgcgcaccggtgactacctcacgcaccccgtcttc
caccagcaccgctccgagaccgcgatgctgcgctatctgcgccggctgtccgaccgggac
tacgccctcgaccgcggaatgatcccgctgggctcctgcaccatgaagctcaacgcgacc
acggagatggagccgatcacctggcccgagttcgggcagatccaccccttcgcgccggtc
ggccaggcggagggctacctcaccctcatccatgagctggaggagcgcctcgccgaggtc
accgggtacgacaacgtctccctccagcccaacgccggctcgcagggcgaactcgccggt
ctgctcgccgtgcgcggctaccaccgggccaacggcgacgagcagcgcaccgtctgcctc
atcccgtcctccgcgcacggcaccaacgcggccagcgcggtgatggccgggatgaaggtg
gtcgtggtgaagaccgccgaggacggcgagatcgacgtcgaggacctgcgggccaagatc
gagcagtaccgcgacgaactcgcggtgctgatgatcacgtacccgtccacgcacggtgtg
ttcgaggagcatgtcgccgacatctgcgccgccgtccatgacgcgggcggccaggtctat
gtcgacggcgccaacctcaacgcgctggtcggcctcgccaagccgggccgcttcggcggt
gacgtctcgcacctcaacctgcacaagacgttctgcatcccgcacggcggcggcggcccg
ggcgtcggcccggtcggtgtgcgcgcgcatctggcgccgtatctgccgaaccacccgctg
cagccggaggccggccccgagacgggtcccggcccggtctcggcggctccctggggctcc
gcgggcatcctgccgatctcctgggcgtacgtccggctcatgggcggcgagggcctcaag
cgcgccacgcaggtggccgtgctctccgccaactacatcgccaagcgcctggagccgcac
tacccggtgctctacaccggtccggccggcctggtcgcgcacgagtgcatcgtcgacctg
cgggcgctgaccaaggagaccggcgtgaccgtggacgatgtggccaagcggctgatcgac
tacggcttccacgcgccgaccatgtcgttcccggtggccggcacgctgatgatcgagccg
accgagtccgaggacctgaccgagatcgaccgcttctgcgacgcgatgatcgccatccgt
gcggagatcgagaaggtcggctcgggcgagtggcccgccgacgacaacccgctgcggaac
gccccgcacaccgccgcggcgctcggcggtgcctgggagcacgcgtacacgcgggaggag
gccgtcttcccggccggtgtcccggccgcggacaagtactggccgccggtgcgccgtatc
gaccaggccttcggcgaccgtaacctggtctgctcctgcccgccgatggacgcctaccag
gagtag
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