Streptomyces nodosus: CP978_34025
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Entry
CP978_34025 CDS
T06839
Name
(GenBank) extradiol ring-cleavage dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
snq
Streptomyces nodosus
Pathway
snq00362
Benzoate degradation
snq00624
Polycyclic aromatic hydrocarbon degradation
snq00627
Aminobenzoate degradation
snq01100
Metabolic pathways
snq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CP978_34025
00627 Aminobenzoate degradation
CP978_34025
00624 Polycyclic aromatic hydrocarbon degradation
CP978_34025
Enzymes [BR:
snq01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
CP978_34025
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Gene cluster
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QEV42893
UniProt:
A0A0B5DVZ7
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All DBs
Position
complement(7648350..7649210)
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AA seq
286 aa
AA seq
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MAKVVAVLATTHHPFFYRTSNLPAEERPEYADAWVRKVEAYRATLERARPDLLVMVGSDH
FHQLWLDNMPQFLVGKAPMYDANFYNEEREFGLPRMSLKGHEELSAHVLREGLDRGFDLA
FSNELRIDHSITCPIITVRPQNDLPIVPIYTNIFAPPLPRPERFVQLGRTIREIINSWRG
DLRVAVIGSGHLSLELGGPRQFGPHGPDPEFDRRAIGWISSGDIEGALAGVSLDSLWEPG
NATHGFLDFLLMMGVAGERKADYADSLDLFHTMEAYFTWYPNGVPA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtcgtggccgtgctggccaccacgcaccacccgttcttctaccggaccagc
aacctgcccgccgaggaacgtccggagtacgcggacgcatgggtgcgcaaggtggaggcc
taccgggcgacactggagcgggcccgtccggacctgctggtgatggtgggctcggaccac
ttccaccagttgtggctggacaacatgccgcagttcctcgtaggcaaggcaccgatgtac
gacgccaacttctacaacgaggagcgggagttcggcctgccgcgcatgtcactcaagggg
catgaggagctgtccgcccatgtgctgcgcgaggggctggaccgcggattcgacctggcg
ttcagcaacgaactgcggatcgaccacagcatcacctgcccgatcatcacggtgcggccc
cagaacgatctgcccatcgtgccgatctacaccaatatcttcgccccgccgctcccccgg
cccgagcgtttcgtgcaactggggcgcaccatcagggagatcatcaactcctggcgggga
gacctcagggtcgcggtgatcggcagcggccatctgtccctcgaactgggcggtccgcgc
cagttcggaccgcacggccccgaccccgagttcgatcgacgggccatcgggtggatctcc
tccggtgacatcgagggcgccctggccggggtcagcctggacagcctgtgggagccgggc
aacgccacccatggcttcctggacttcctgctgatgatgggcgtggccggcgaacgcaag
gccgactacgcggacagcctcgatctgtttcacaccatggaggcctacttcacctggtac
ccgaacggagtgccggcatga
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