Sneathia vaginalis: VC03_02455
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Entry
VC03_02455 CDS
T03854
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sns
Sneathia vaginalis
Pathway
sns00240
Pyrimidine metabolism
sns01100
Metabolic pathways
sns01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sns00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VC03_02455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sns02044
]
VC03_02455
Enzymes [BR:
sns01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VC03_02455
Secretion system [BR:
sns02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VC03_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC2
APOBEC_N
APOBEC4_like
APOBEC4
Motif
Other DBs
NCBI-ProteinID:
AKC95407
UniProt:
A0A0E3Z9U1
LinkDB
All DBs
Position
494397..494882
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AA seq
161 aa
AA seq
DB search
MYKREGYISWDEYFMGLAFLSGKRSKDPVTQVGACIVKDKKIIGIGYNGFPKGSDDDELS
WGKTSNNILDTKYPYVVHAELNAILNSIMKLNGSTIYVTHYPCNECAKAIVQSGISKVVY
YSDKHKHHELTKASTIIMENAGIEIQKYEERDQEILIKFCD
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaagagaaggatatatttcatgggatgaatattttatgggattagctttttta
tcaggaaaaagaagtaaagatcctgttacacaagttggtgcttgtatagttaaagataag
aagattataggtataggttataatggttttcctaagggaagtgatgatgatgaattgtca
tggggtaaaacaagtaataatattttagatactaaatacccttatgtagttcatgcagaa
ttaaatgctatattaaatagtataatgaaattaaatggaagtactatttatgtaacacac
tatccatgcaatgaatgtgcaaaagcaatagtgcaatctggaataagtaaggttgtatat
tattctgataagcataaacatcacgagttaacaaaggcttctacaataataatggaaaat
gcaggaatagaaatacaaaagtatgaagaaagagatcaagaaattttaataaaattttgt
gattaa
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