Streptomyces nigra: DC008_16080
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Entry
DC008_16080 CDS
T05839
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
snz
Streptomyces nigra
Pathway
snz00190
Oxidative phosphorylation
snz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DC008_16080
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC008_16080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snz03019
]
DC008_16080
Enzymes [BR:
snz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
DC008_16080
Messenger RNA biogenesis [BR:
snz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DC008_16080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
DUF3509
Motif
Other DBs
NCBI-ProteinID:
AWE51083
LinkDB
All DBs
Position
3494747..3496984
Genome browser
AA seq
745 aa
AA seq
DB search
MSQSSNAQAQVQHAQPSVGSIAAHRPHTVTSAAVSDLEPDIDADLDAYDIGEVEGVQLPQ
GRFLDRERSWLAFNERVLELAEDPTTPLLERANFLAIFASNLDEFFMVRVAGLKRRIATG
VATRSASGLQPREVLEMIWARSRELMARHAACYHEDVAPALAEEGIHLVRWNELTEKEQA
RLFTLFRHQIFPVLTPLAVDPAHPFPYISGLSLNLAVRVRNPVTGTPHFARVKVPPLLSR
FLEASPGRHVPLEDVIAAHLEELFPGMEVLEHHAFRVTRNEDLEVEEDDAENLLQALEKE
LMRRRFGPPVRLEVEENINQEVLDLLVRELKISEAEVYPLTGPLDLTGLFRIASIDRPEL
KYPKFIAGTHRDLAEVESASAPDIFAALRSRDVLLHHPYDSFSTSVQAFLEQAADDPDVL
AIKQTLYRTSGDSPIVNALIDAAEAGKQVLVLVEIKARFDEHANIKWARKLEEAGCHVVY
GLVGLKTHCKLSLVVRQEGETLRRYSHVGTGNYHPKTARLYEDLGLLTADPQVGADLSDL
FNRLSGYSRRETYRRLLVAPKSLRDGLIARINKEVQHHRAGRPAYVRIKVNSIVDEALID
ACYAASQAGVPVDIWVRGICAVRPGVTGLSENVRVRSVLGRFLEHSRVFAFGNGGEPEVW
IGSADMMHRNLDRRIEALVRVTDPAHRAALNRLLETGMSDTTASWHLGPDGEWTRHATDA
EGQPLRNVQEMLIDARRRRRGTPTP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctcgaacgcccaggcacaggtccagcacgcgcagccctccgtgggctcg
atcgcggcgcaccgcccgcacaccgtcacctccgcggccgtctccgacctggaacccgac
atcgacgccgatctcgacgcctacgacatcggcgaggtcgagggcgtccagctgccccag
ggccgcttcctcgaccgggagcgcagctggctggcgttcaacgagcgggtgctggaactc
gccgaggaccccaccaccccgctgctcgagcgggcgaacttcctggccatcttcgccagc
aacctggacgagttcttcatggtccgggtggccggtctgaagcgccgcatagccaccggc
gtggccacccgctccgcctccgggctccagccgcgcgaggtgctggagatgatctgggcc
cgctcgcgcgagctcatggcccggcacgccgcctgctaccacgaggacgtcgctcccgca
ctcgcggaggagggcatccacctggtccgctggaacgagctgacggagaaggagcaggcc
cgcctcttcaccctgttccggcaccagatcttcccggtgctgaccccgctggccgtcgac
ccggcgcaccccttcccttacatctccgggctctccctgaacctggccgtccgggtccgc
aaccccgtcaccggcaccccgcacttcgcccgcgtcaaggtgcccccgctgctctcccgc
ttcctggaggcctcccccggccggcacgtcccgctggaggacgtcatcgccgcgcacctg
gaggagctgttcccgggcatggaggtgctggagcaccacgcgttccgggtcacccgcaac
gaggacctggaggtcgaggaggacgacgcggagaacctcctgcaggctctggagaaggag
ctcatgcggcgccgcttcgggccgccggtgcgcctggaggtcgaggagaacatcaaccag
gaggtcctggacctgctggtgcgcgagctgaagatcagcgaggccgaggtctacccgctg
accggccccctggacctcacgggcctcttccggatcgcctccatcgaccggcccgagctg
aagtacccgaagttcatcgcgggcacccaccgcgacctcgccgaggtggagtcggcgtcc
gcgccggacatcttcgccgcgctgcgcagccgggacgtcctgctgcaccacccgtacgac
tccttctccacgtccgtgcaggcgttcctggagcaggcggccgacgacccggacgtcctc
gcgatcaagcagaccctgtaccggacctccggcgactcccccatcgtcaacgcgctcatc
gacgcggccgaggccggcaagcaggtcctggtgctggtcgagatcaaggcgcgcttcgac
gagcacgccaacatcaagtgggcgcgcaagctggaggaggccggctgccacgtcgtgtac
ggcctggtcggcctgaagacgcactgcaagctgtcgctggtggtccgtcaggagggcgag
accctgcggcgctacagccacgtcggcaccggcaactaccacccgaagacggcccgcctg
tacgaggacctgggcctgctgaccgccgacccgcaggtcggcgcggacctgtccgacctg
ttcaaccggctgtcgggctactcgcgccgcgagacctaccgacgtctgctggtcgctccc
aagtccctgcgggacggcctgatcgcccggatcaacaaggaggtccagcaccaccgcgcc
ggacgtcccgcctacgtccgcatcaaggtcaactcgatcgtcgacgaggccctgatcgac
gcctgctacgccgcctcccaggcgggcgtcccggtggacatctgggtgcgcggcatctgc
gcggtccgcccgggcgtgaccggcctctcggagaacgtccgcgtccgctcggtcctcggc
cgcttcctggagcactcccgggtgttcgccttcggcaacggaggcgagcccgaggtgtgg
atcggcagcgccgacatgatgcaccgcaacctcgaccgccggatcgaggccctggtccgg
gtcaccgacccggcgcaccgcgcggcgctgaaccggctcctggagaccgggatgtccgac
accaccgcgtcctggcatctcggcccggacggcgagtggacccggcacgcgacggacgcg
gagggccagcccctgcgcaacgtccaggagatgctcatagacgcccggaggcgccggcgt
ggcacaccgaccccctga
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