Sulfuriroseicoccus oceanibius: G3M56_005215
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Entry
G3M56_005215 CDS
T07818
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
soa
Sulfuriroseicoccus oceanibius
Pathway
soa00540
Lipopolysaccharide biosynthesis
soa01100
Metabolic pathways
soa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
G3M56_005215 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
soa01005
]
G3M56_005215 (rfaD)
Enzymes [BR:
soa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
G3M56_005215 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
soa01005
]
Core region
G3M56_005215 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QQL45979
UniProt:
A0A6B3LCG4
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All DBs
Position
1321065..1322069
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AA seq
334 aa
AA seq
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MKISANKRILVTGGAGLIGSALIWRLNQMGCDRILVSDHLNLGEKWKNLVPLRYEDYIAG
DDLRAKIAAGEDLGQIDLILHMGACSATTEKDSDYLMRNNYQYSQELCRYALKHGAKFVY
ASSAATYGDGANGMDDAGELEPLRPLNMYGYSKHLFDKWAQREGILDRIVGLKFFNVFGP
NENHKGEMRSVVNKAFHQIRETGRVSLFKSHHPDYEDGKQMRDFLYVKDCVEMTLHLASS
PLAGGLYNLGSGKAQTWLDLVEAIFAALDMEPNIDFVEMPEHLRGKYQYFTEANVARLEK
TGYTAGTRPLKESVRDYVQNYLVADCFLGDGADE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttccgcgaataaaaggatcctggtgacaggaggggctggcctgattggcagt
gcgttgatttggaggctcaaccaaatgggctgcgaccggatcctggtcagtgatcacctg
aatttgggcgagaaatggaagaacctggttccgcttcgctacgaggactacatcgcgggc
gacgacctgcgcgcaaaaattgccgctggtgaggatcttggccagatcgatttgattttg
cacatgggagcctgttccgcaacgaccgagaaggattctgattatctgatgcgcaacaac
taccagtactcacaggagttgtgccgctacgcactcaagcacggtgccaagtttgtctat
gcttcgtcggcggcgacctacggcgatggcgcgaatggaatggacgacgccggtgagctc
gagccgttgcgtccgctcaacatgtatgggtactcaaagcacttgttcgacaagtgggct
cagcgcgaggggattctcgacaggattgtcgggttgaagttcttcaatgtgtttggcccg
aacgagaaccataaaggagagatgcgcagtgtggtgaacaaagcgttccatcagatccgc
gagacggggcgggtttctcttttcaagagtcaccacccggactacgaggatggcaagcaa
atgcgggatttcctctatgtgaaggactgcgtggagatgaccttgcatctggcgtcgagt
ccgttggcgggtggtttgtacaatttggggtcgggcaaagcgcagacctggctggatttg
gtagaggcgattttcgccgcactggacatggagccgaatatcgacttcgtggaaatgccg
gaacatctgcgcggaaagtaccaatactttaccgaagccaacgtggcgcgcttggagaag
acgggctacacggccggcacgcgtccgctcaaggagtcggtgcgtgattacgttcagaat
tacttggtcgctgattgtttcctcggcgatggggctgacgaatag
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