Solenopsis invicta (red fire ant): 105196940
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Entry
105196940 CDS
T03916
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03020
RNA polymerase
soc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105196940
09124 Replication and repair
03420 Nucleotide excision repair
105196940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105196940
03400 DNA repair and recombination proteins [BR:
soc03400
]
105196940
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105196940
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105196940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
105196940
NCBI-ProteinID:
XP_011161410
LinkDB
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Position
12:complement(14545125..14547818)
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AA seq
276 aa
AA seq
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MPYANQPSVHISDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWIQLEANSTVLS
DEFLAHRIGMIPLISDDVVDRIQYTRDCQCMDFCPECSVEFTLDVKCTEDQTRHVTTADF
KSSDPRVLPVTSRHREDEASEYGETDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNSMRHTLYPKPDEWPKSEYTELEEDQYEAPFNWEAKPNKYYFNVESSGALK
PENIVMMGIAALKNKLSNLQTQLSHEVQSDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaatcaaccatcggtccatatttcggatttaaccgaggaaaatgttaaa
tttcaagttgaagatactgaactaagcgttgcaaacagcatgagacgtgtttttatcgcc
gaaacgccgactatggccattgattggatacaactagaagctaattctaccgttttgagt
gatgaatttttagcacacagaattggaatgataccattgatcagtgatgatgtggttgac
agaatacagtacacaagagattgccagtgcatggatttttgtcctgaatgcagtgtggaa
ttcactttggatgttaaatgcactgaagatcaaaccagacatgtaactactgcagatttc
aagtcgagtgatcctagagtattacctgtcacatcgaggcacagagaagatgaagcaagc
gaatatggagaaacggatgagattttgatagtgaaattgagaaaaggacaggaactgaaa
ttaagagcatatgcgaagaaaggttttggaaaggagcatgcaaaatggaatccgactgct
ggtgtaagttttgaatatgatcctgacaattccatgagacacactttgtatcccaaacca
gacgagtggcccaaatcagagtacactgaattagaggaagatcaatatgaagccccgttt
aattgggaagctaaaccaaacaagtattacttcaacgtggagagcagtggggccctaaaa
ccagaaaatattgttatgatggggattgcagcattaaaaaacaaactatcgaatctgcag
acacaattaagccatgaagtacaaagcgacgcattgagcattcatcattag
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