Solenopsis invicta (red fire ant): 105207384
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Entry
105207384 CDS
T03916
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soc03016
]
105207384
Enzymes [BR:
soc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
105207384
Transfer RNA biogenesis [BR:
soc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
105207384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
TraT
Motif
Other DBs
NCBI-GeneID:
105207384
NCBI-ProteinID:
XP_011175118
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All DBs
Position
9:10442427..10445419
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AA seq
538 aa
AA seq
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MPAPCEDIIEDIEDLIASQDITPKERYSSRKHITVRPKRRKQEQVSQPSVLSSVIPGTQT
IYVKTWGCTHNSSDTEYMAGQLATYGYNLTEDKLKADLWLLNSCTVKNPAEDQFRNEIEH
GKNIGKHVVVAGCVPQGAPKSSFLQGLSVIGVQQIDRVVEVVEETLKGNTVRFLKQKKDS
GKKIGGASLSLPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEEIVERAKQA
FEEGVCELWLTSEDTGAYGRDIGTNLPELLWQLVDVIPDGCMMRVGMTNPPYILEHLDEM
AKILQHPRVYSFLHIPVQSGSDQVLADMKREYTRAEFEHVVNFLSERVPGLTIATDIICG
FPTETEMDFEETMTLCQKYKFPSLFINQYFPRPGTPAARMLKVPAQKVKARTKRLSEFFQ
SYELYGHKVGLQQKVLVTEVSHDKQHYVGHNKFYEQVLIPMKQEYMGKMIDVKIKEATKF
SMKGEPIGKGVSPALRSPLPQGIVSKIPYETKPSRYGIATITMIFLAVILRILWKFLT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctccatgcgaggacattatcgaggatattgaggatttaatcgcgtcgcaggac
ataacccccaaggagaggtatagttcacgaaaacatatcacggtacgaccgaagcggagg
aagcaggaacaagtgtcacagccgtctgttttgtcaagcgtaatacctggcacgcagacg
atctacgtgaagacatggggatgcacgcacaacagttcggacaccgaatacatggccggt
cagttggcgacgtacggctacaatttaactgaggataaattgaaagcagatctctggctg
ctgaactcttgtactgtcaaaaatcccgcggaagatcaatttaggaatgaaattgagcat
ggaaagaacattggcaaacatgttgtggtcgctggatgtgtgccacaaggtgccccaaaa
tcttccttccttcaagggctgagtgtgattggagtgcagcaaattgatcgagtggtagaa
gttgtagaggaaaccttgaaaggaaatacagtcaggtttttaaaacagaagaaagattct
ggcaagaagataggcggagcttcactgagtctcccaaaggtgcgccggaatccactcatt
gagattatagctattaacacaggttgcttgaatcaatgtacctactgcaaaacgaagcat
gctcgaggcgaacttggtagttatccaccagaggaaatagtcgaacgagccaagcaagct
ttcgaggaaggagtgtgtgagttgtggctcacatcggaagacacaggtgcctatggtaga
gacattggcaccaacttaccagaattgctgtggcaattagtagacgtgatccctgacggt
tgcatgatgcgcgtaggtatgaccaatccaccgtatatcctagagcatttggatgaaatg
gccaagatcctgcaacaccctagggtctatagctttttacacatcccagtgcagtccggt
agtgatcaggtgctggctgacatgaagcgagaatacacgcgtgctgagttcgaacatgtg
gtgaactttctgagcgagcgagtgcctggtctaacgatcgccacggatattatttgtggc
tttcccacggaaacggagatggatttcgaggagacgatgacgctttgtcaaaagtacaag
tttccaagcctcttcatcaatcagtacttcccccgacctggcacgcccgccgccagaatg
ctgaaggtacctgcgcagaaagtaaaggcaagaaccaaaaggttatcagaatttttccaa
tcatatgaactgtacggacataaagtgggactgcaacaaaaggtgctagtgacggaagta
tcacatgacaaacagcattacgtgggccataacaaattctatgaacaggtgttgattccg
atgaagcaagagtacatgggaaaaatgatcgacgtgaagattaaagaagcgacgaagttc
tccatgaaaggagaaccgatcggtaaaggtgtgtccccggcgctaaggtctcctttaccg
caaggaatcgtttccaaaataccatacgaaacgaagccatcaagatacggaatagcaacg
attacgatgatctttttagctgtgatacttagaatattatggaaatttctaacttag
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