KEGG   Spinacia oleracea (spinach): 110784380
Entry
110784380         CDS       T05137                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03020  RNA polymerase
soe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110784380
  09124 Replication and repair
   03420 Nucleotide excision repair
    110784380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110784380
   03019 Messenger RNA biogenesis [BR:soe03019]
    110784380
   03400 DNA repair and recombination proteins [BR:soe03400]
    110784380
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110784380
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110784380
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110784380
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 110784380
NCBI-ProteinID: XP_021844524
UniProt: A0A9R0JRQ3
LinkDB
Position
6:142103285..142105042
AA seq 188 aa
MVVLLRHYSIDIRQSSIMYFHIALEKTVEIESRHFGHRLRDNIISKLIKDVEGTCSERHG
FVVAVTGIEDIGKGLIRDNGTAFVIFPVKFKCLVFRPFKGETVQAVVTMVNKMGFFAEVG
PVQIFVSNHLIPDDMEFQSADTPTYSTSDGLVKIKKDTEVRLKIIGTRVDTKEIFCIGAM
KEDYMGVI
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtagtactactgagacactactcgatcgatattcgacaatcatcaatcatgtatttc
catatagctctagaaaaaactgtagagatagagtctcgtcactttggtcatcgtcttcga
gacaacatcatctccaaactcattaaagacgtggagggtacttgcagcgaacgtcatgga
tttgtggtggcagttacaggaatcgaggatattggcaaaggtttaattagggataatgga
actgcctttgtcattttccctgtcaagtttaaatgtctcgtctttcgtccttttaagggt
gagaccgttcaagctgttgttactatggttaacaagatgggattctttgccgaggttggt
cctgttcaaattttcgtgtctaatcatttaatacccgatgatatggaattccaatctgca
gacacacccacttattctacttcagatggtttggttaagattaagaaggatactgaagtt
cgactcaaaattattggtactcgggttgacaccaaagaaatcttttgcataggcgcaatg
aaagaagattacatgggtgtgatatag

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