Spinacia oleracea (spinach): 110803608
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Entry
110803608 CDS
T05137
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03020
RNA polymerase
soe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110803608
09124 Replication and repair
03420 Nucleotide excision repair
110803608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110803608
03019 Messenger RNA biogenesis [BR:
soe03019
]
110803608
03400 DNA repair and recombination proteins [BR:
soe03400
]
110803608
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110803608
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110803608
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110803608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
110803608
NCBI-ProteinID:
XP_021864824
UniProt:
A0A9R0JBI4
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Position
6:103783094..103789566
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AA seq
177 aa
AA seq
DB search
MFFHIILERNMQLHPRHFGPRLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIEHVGKGLIR
DGTGFVTFPVKYKCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQVFVSNHLIPDDMEFQ
SADTPNYTTSDNSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAAS
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccatattatactggagaggaacatgcagcttcaccctcgccattttggccca
cgtctccgggataaactcgtttctaagctcatgaaagatgttgagggaacctgcagcggg
cgccatggatttgtggtggcaatcatgggaattgagcatgttggcaaggggttgattaga
gatggaactgggttcgtcactttccctgtcaagtataaatgtgttgtatttcggcctttt
aaaggcgagattcttgaggctgttgttaccatggttaataagatgggtttctttgctgag
gctggccctgttcaggtgtttgtgtctaatcatctgataccggatgatatggagttccaa
tctgctgatacaccaaattatacaacttcagataattcagtcaaaattcaaaaagacagt
gaggtgcggctcaagattatcgggactagggtggatgcaacagaaattttctgcatagga
acgataaaagacgattttctgggcgtcataagtgaccccggtgcagcttcatga
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integrated database retrieval system