Shewanella oncorhynchi: RA178_00935
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Entry
RA178_00935 CDS
T09381
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00450
Selenocompound metabolism
sog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RA178_00935 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_00935 (selD)
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
RA178_00935 (selD)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RA178_00935 (selD)
Prokaryotic type
RA178_00935 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
WMB73233
UniProt:
A0AA50KE79
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All DBs
Position
complement(214565..215623)
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AA seq
352 aa
AA seq
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MSDSPVTLPESIKLTEYSHGAGCGCKISPKVLSTILASQLPVFTDPNLLVGNQSRDDAAV
YKLNDDIGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGTPIMAIAILGWPINKLP
AEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVTGQIALSDLKQNDTAKAGDRL
YLTKPIGIGILTTAQKQKKLRDEDSLIAVNAMCQLNTIGATIAKISGVNALTDVTGFGLA
GHLLEMCQGANLTAKLKFDAVPLLPRALDYLALGCVPGGTHRNYDSYGEHLPELSEHQKA
ILCDPQTSGGLLVAVSAAAEAELIALLNTNHIAPICIGSLETPTTAANVVLC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattccccagttacactcccagaatcaatcaagctaacagaatatagtcatggc
gcaggttgtggctgcaaaatatcccctaaagtgctcagcactatcttagcctcgcaatta
cctgtatttaccgatccaaatctgctggttggtaatcagagccgcgacgatgctgcagtg
tacaaactcaatgatgacataggcatcattagcactaccgatttttttatgccaattgtt
gacgatccattcaccttcggtcgtatcgcagcgaccaatgcgatcagcgatatttatgcc
atgggcggcacgcctattatggcgattgcaattttaggttggccaatcaataaactaccc
gcagaaatcgcacagcaagtggtcgatggcggcagacaagcctgcatggaagcggggatc
atgctagccggtggtcatagcatagacgcacccgaacctatttttggtctcgcggttacc
gggcaaattgccttaagtgatttaaaacagaatgataccgctaaagccggcgatcgttta
tatctcactaaacctatcggcattggtattttaaccacagcgcaaaaacagaaaaaactc
cgcgatgaagatagtctcattgcggtaaatgccatgtgccaactcaatactataggcgcg
accattgcaaaaattagcggtgtaaatgccctgaccgatgtcacaggttttggactggcg
ggacacttactcgaaatgtgccaaggcgccaacctcactgcgaagcttaaatttgatgca
gtgccattgttaccacgcgccttagattatttggccttaggttgtgttcctggcggaact
caccgtaattacgatagttatggcgagcatctccccgagctcagcgagcatcaaaaagcg
atactgtgtgatccgcaaaccagtggtggcctgttagttgccgtctcggccgcagctgaa
gcggaattaattgccctactcaatacgaaccacatcgccccaatctgcattgggtcactg
gaaacaccaaccactgcagcgaatgtggtgttgtgctga
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