Shewanella oncorhynchi: RA178_02535
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Entry
RA178_02535 CDS
T09381
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00330
Arginine and proline metabolism
sog00480
Glutathione metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RA178_02535
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RA178_02535
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RA178_02535
Enzymes [BR:
sog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RA178_02535
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Fer4_11
Motif
Other DBs
NCBI-ProteinID:
WMB73518
UniProt:
A0AA50KER9
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Position
536495..537670
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AA seq
391 aa
AA seq
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MSQFQSIDVADYYDMDTFKRIEAFAKDKATPFVVIDTSIIAKQYDDMVNSFPYANVYYAV
KANPAAEILSLLKDKGSNFDIASIYELDMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGV
RMYASDSEADLRMIAEEAPGSRIYVRILTEGTDTADWPLSRKFGCQNEMAYELLVLAQEL
GLEPFGISFHVGSQQRDIGAWDSAIGKVKSIFDRLRDEHNITLKMINMGGGFPANYIDKT
NQLGVYAEQITHFLKEDFGDDLPQIILEPGRSLISNAGILVSEVVLISKKSYTALERWVF
TDVGKFSGLIETMDEAIKFPIYTERQGELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIG
DRMYWLTAGAYTTTYSAVCFNGFPPLKDYYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcaatctattgatgttgctgactattatgatatggacacattcaagcgt
attgaagcgtttgccaaagacaaagcaaccccgttcgtcgtgatcgataccagtatcata
gcgaaacaatacgatgacatggttaatagttttccttacgccaacgtttattatgcagtt
aaggcaaaccccgcggccgagatcttatctttactaaaagataaagggtcaaactttgat
attgcctcgatttatgagctagatatggtcatgaatgtcggtgtgacaaccgatcgagtc
agctatggtaataccattaaaaagcgccaagatgtgcgtgcattttatgagcgtggcgtg
cgtatgtatgcatctgactcagaagctgatttgcgaatgatcgctgaagaagcaccgggt
tcacgtatttatgtgcgcattctgaccgaaggtacagataccgctgattggccgttatcc
cgtaaattcggctgccaaaacgaaatggcctatgagctattagtattggcacaggaatta
ggcttagagccttttggtatttctttccatgtgggttctcagcaacgtgacataggtgct
tgggattccgctattggtaaagtgaaaagtatttttgaccgtttgcgtgatgagcacaat
atcaccttgaagatgatcaacatgggtggcggtttccctgctaactatattgataaaacc
aatcaattgggtgtgtatgccgagcaaatcacccacttcttgaaggaagattttggtgat
gatttaccacaaattattttggaaccaggtcgttcgttgatctctaacgcggggatttta
gtgtctgaagtggtactgatcagcaaaaaatcttacacagcgttagagcgttgggtgttt
accgatgtgggtaaattctctggcttgattgaaacgatggacgaggcgattaagttcccg
atttatactgagcgtcaaggcgagctggataaatgcgtgattgccggcccaacctgtgac
agtgcagatatcatgtatgagcactatagctatggcttaccaaatgacttagccattggc
gaccgtatgtattggttaaccgcaggggcttatacgacgacgtattcagcagtatgcttt
aacggtttcccaccgctgaaggattactatctgtaa
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