Shewanella oncorhynchi: RA178_15625
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Entry
RA178_15625 CDS
T09381
Symbol
thiI
Name
(GenBank) tRNA uracil 4-sulfurtransferase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00730
Thiamine metabolism
sog01100
Metabolic pathways
sog01240
Biosynthesis of cofactors
sog04122
Sulfur relay system
Module
sog_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RA178_15625 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RA178_15625 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_15625 (thiI)
Enzymes [BR:
sog01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
RA178_15625 (thiI)
Transfer RNA biogenesis [BR:
sog03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RA178_15625 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
WMB71843
UniProt:
A0AA50Q5A0
LinkDB
All DBs
Position
complement(3484349..3485803)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKDKPE
LAQAFGERLACIPGIAHVVQVDEYSFESVDDIYQQVLPVYRDQLAGKTFCVRVKRTGDHD
FNSIEVERYVGGGLNQFTDALGVRLKNPDITVNLEIERDNLYMVTKRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FISVPFEPVVAEILERIDNGQMGVVLKRMMMRTAARIAERMGIQALVTGESLGQVSSQTL
TNLNVIDRCTELLILRPLIAMDKQDIINESRKIGTEDFAKSMPEYCGVISQKPTVKAVLA
KVEAEEKKFSEDLIDQIIAQSVTIDIREIAEQMDTRITETETVASIDTNQVVIDIRAPEE
EESKPLQIEGIEIKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtatccagaaatcatgatgaagagcaagcctgtacgcatg
cgcttcaccaaaatgctcgaaactaacatccgtaatgtgcttaaaaaagttgacgaagat
gcaaaagtgcagcgtcaatgggaccgcattatggtgatggtaccaaaggataagcctgaa
ttggcccaagctttcggtgagcgtctggcgtgtattcctggcattgcacacgtagtgcaa
gtggatgagtacagctttgaatctgttgatgatatttatcagcaagtcttgcctgtttac
cgtgaccaactcgcgggtaaaaccttctgcgtgcgagtaaagcgtactggcgatcatgat
tttaattctattgaagttgagcgttatgtcggtggtggcttaaaccagtttactgatgcg
ctgggcgtgcgtttaaagaatccggacattaccgttaatttagagattgagcgtgataat
ctttatatggtgactaagcgtattgaaggtctaggcggttttccgatggcaacacaggaa
gatgtattgtccttgatttcgggtggttttgactctggcgtctctagctatcaatttatc
aaaaaaggcgctcgtacccactactgtttcttcaatctgggcggcgcacagcacgaaatt
ggtgttaaacaagtggcttaccatttgtggaaaacctacggtgaatcccacaaagtgaag
tttatctccgtgccttttgagcctgtggttgctgagattttagagcgtatcgataacgga
caaatgggcgttgtattgaaacgcatgatgatgcgtaccgcggcgcgtatcgccgagcgt
atgggcattcaagccttagttaccggtgaaagtttaggccaagtgtctagccagaccctg
accaacttaaacgtcatcgaccgttgtactgagttattgattctacgtcccttaatcgcc
atggataagcaagacattatcaacgagagccgtaaaatcggcaccgaagattttgctaaa
tcaatgcctgaatattgcggcgtcatttcgcaaaagccgacggtaaaagcggtattagct
aaggttgaagcggaagagaaaaagttctctgaggatttgatcgatcagatcatcgcccaa
tctgtcactatcgatatcagggagatcgcagaacaaatggatactcggattactgagaca
gaaacggttgctagtatcgatactaaccaagtggtcattgatattcgtgcccctgaagaa
gaggaaagcaaaccgctgcaaattgaaggtattgagataaagcgcatcccattcttcaag
ttagcgactcagtttgccgatctcgataagcaaaagacttatttgctctattgtgagcgt
ggggtgatgagtaaattgcaggcattgtatttaatcgagcaaggctacacgaacgtgaaa
gtgtatcgtccataa
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