Shewanella oncorhynchi: RA178_16260
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Entry
RA178_16260 CDS
T09381
Symbol
gltB
Name
(GenBank) glutamate synthase large subunit
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00250
Alanine, aspartate and glutamate metabolism
sog00910
Nitrogen metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RA178_16260 (gltB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RA178_16260 (gltB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sog01002
]
RA178_16260 (gltB)
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
RA178_16260 (gltB)
Peptidases and inhibitors [BR:
sog01002
]
Cysteine peptidases
Family C44
RA178_16260 (gltB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
WMB71964
UniProt:
A0AA50Q2H6
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All DBs
Position
3638842..3643290
Genome browser
AA seq
1482 aa
AA seq
DB search
MSLYHPSFERDNCGFGLIAQMDGEASHRIVRTAIHGLDRMKHRGGIASDGRTGDGCGLLM
QLPVQFFEAIAAENDWHLSRKFAVGMLFLSQDDELADQAKFILERELERETLSIAGWRKV
PVNPDVLGEIGKASLPQIYQVLINAPIGWREKDLERRLYMARRRLEQQITDDKDFYVASL
SGQVIVYKGLMMPVDLPAFYPDLADIRLKSSICLFHQRFSTNTSPKWPLAQPFRYLAHNG
EINTITGNRQWARARAYKFNSPLLPDLQQAAPFVNETGSDSSSLDNMLEMLLSGGMDLYR
AMRLLIPPAWQSNPEMDDELKAFYDFNSMHMEPWDGPAGIVMTNGRHAACAVDRNGLRPS
RYVITKDRILTLASEVGIWDYAADEVIEKGRVGPGELLVLDTLNGRLYQSFEIDNDLKRR
HPYKEWMAKNSRTLTPAEDLASEQHGASELSPELLLQYQKQFGYTREELEQVIWVLAKQG
EEATGSMGDDTPMAVLSKKSRSLYDYFRQKFAQVTNPPIDPLREKHVMSLTTCIGREQNL
FNETTGHAYRVMFNSPILLFSDFNQLLGLDSTYYRANIVDLNYEPQEGLESAIRRITAEA
ERLARSGTTLLILSDRAIGKTAQVIPAAMAVGSVQQMLVNKSLRCDTNIIVETASARDPH
HFAVLLGFGATAIYPYLVYESISELAKRHDLTDTTALMLNFRYGIEKGLRKIMSKMGIST
VGSYRCSQQFEAIGIASEVIELCFKGVISRIEGAGFAEIAQDQAILHKAAYRAHVPLPQG
GLLKYVEGGEYHCFNPDVVNTLQASLIDKDFASYKKFAELVDNRPVATLRDLIGIKGAQT
SINVADVEAASNLYSRFDSAAMSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDARRFNT
ERNSAIKQIASARFGVTAHYLVNADVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRHARP
GVTLISPPPHHDIYSIEDLAQLIFDLKQINTKALISVKLVSEPGVGTIATGVAKAYADMI
TISGYDGGTGASPITSVKYAGSPWELGLAEVHQSLVENGLRHKIRLQVDGGLKTGTDVIK
AALLGAESFGFGTVPMIALGCKYLRICHLNNCATGVATQDKNLRDNHYHGLPERVMTYFE
FVAQEVREWMATLGVSKFEDLVGRSEWLYALEGQTAKQQGLDLSPILYQPKVPATSSRTW
QETNPPADLGLLNQHLLNECQSAVDKGESFDAAYSINNTDRSVGATLSGYIASTLGVKGT
KAPVKLSFNGSAGQSFGVWNSPGLELKLCGDANDYVGKGMSGGQIVIYPPIGSPFQSERS
AIVGNTCLYGATGGKFFAAGQAGERFAVRNSGAIAVVEGLGDNGCEYMTSGIVVVLGKTG
VNFGAGMTGGFAYVFDQFGRFNRRVNTELVDTQKLESPIHQQHLKGLIEAHVAETGSEHA
KMILSDFGNWLDCFVLVKPKNIAVADLLKLEKSSPELVVKAG
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatatcatcccagttttgagcgggacaattgtggttttgggttgatagcacag
atggatggcgaagccagccaccgtatagtgcgcacggcaatccatggtctagatcgcatg
aagcaccgcgggggcattgcctccgacggccgcactggcgacggctgtggtttattaatg
caattacccgtgcaattttttgaagcgattgccgcggaaaatgattggcatttgagccga
aaatttgccgtaggtatgctgtttttaagtcaagacgatgaactggctgaccaagccaag
tttattcttgagcgcgaactcgagcgtgaaaccttaagtattgcaggctggcgcaaggtg
cctgtcaatcccgatgtgttaggtgaaattggcaaggctagcctgccacaaatctatcaa
gtgctgatcaacgcccccattggctggcgtgaaaaagacttggaacgtcgcctttatatg
gcgcgtcgccgcctagagcagcagatcaccgacgacaaagacttctatgtcgcgagtttg
tctggccaagttatcgtctataaaggtctgatgatgcctgtagacttgcccgcgttttat
cccgatctcgcggacattcgcttaaaaagctctatctgcctattccatcaacgtttctca
acgaatacttctcctaaatggccattagctcagccgtttagatatttagcccataacggc
gaaatcaatacgattactggtaaccgtcaatgggctcgtgcccgtgcctataagtttaat
tcaccgctactgccagatttgcagcaggccgctccctttgtgaatgaaacaggctcagac
tcttcatctttagataacatgctggaaatgctgttatccggtggcatggacttataccgt
gcaatgcgtctattgatcccgcctgcttggcaaagtaatccggaaatggatgacgaatta
aaagccttctatgactttaactctatgcacatggagccttgggatggtccggcaggtatt
gtgatgaccaacggtcgccatgccgcctgcgctgttgaccgtaatggtctacgtccatca
cgttatgtgatcacaaaagatcgtattttgaccttagcttccgaagtcggaatttgggat
tacgccgccgatgaagtgattgaaaaaggccgtgttgggcctggtgaattgctggtatta
gataccttgaacggccgcctgtaccaatcctttgaaattgataacgatcttaaacgccgc
cacccttacaaagagtggatggcgaaaaacagccgtactttaacgccagcggaagattta
gcctctgagcagcacggtgccagcgaattaagccctgaactattgctgcaataccaaaaa
caatttggctatacccgtgaggaattagaacaagtcatttgggtattggcgaagcaaggt
gaagaagccacaggctccatgggcgacgacacacctatggcggtattgtcgaaaaagtca
cgttcactgtatgactattttaggcagaaatttgctcaagtaacgaatccacctatcgac
cccttacgtgaaaagcacgtcatgtcgttgaccacttgtattggccgtgaacagaacctc
ttcaatgaaacgactgggcatgcttaccgggtgatgttcaattcacctattttattattc
agtgattttaaccagttactgggattagatagcacttactatcgcgccaatattgtcgat
ttaaattacgaaccacaggaaggcttagaaagcgccattcgccgcatcacagccgaagcc
gagcgtttagcccgcagcggcacgactttgttgatcctttcggatagagccataggtaaa
acggcgcaagtgatccccgcggccatggcggtcggttctgtgcaacaaatgctggtgaat
aagagcctgcgctgcgacaccaacattattgttgaaaccgcatcggcgcgagatccgcat
cactttgctgtattgcttggctttggtgccacggcgatttatccgtatttagtgtatgag
tcaatttccgaactggcaaaacgccatgacttaaccgataccacggcattgatgttgaac
ttccgctacggcatcgaaaaaggcttgcgtaagatcatgtccaaaatgggcatcagcact
gtcggctcctatcgttgcagtcagcaatttgaagccataggcattgccagcgaagtgatc
gaactgtgttttaaaggcgtaattagccgcatcgagggtgcaggctttgcagaaatcgcc
caagaccaagcgattttgcacaaagcggcctaccgtgcccatgtgccattaccacaaggt
ggcctactaaaatacgttgagggcggcgagtatcactgcttcaaccctgatgtggtcaac
accttgcaagcatcattgattgacaaagacttcgcgagctataaaaaattcgccgaactc
gtcgacaatcgtcccgtggccacactgcgtgacttaatcggtattaagggcgcgcaaaca
tcgattaatgtcgccgatgtagaagcggcatcaaatctatattcacgttttgacagtgcc
gccatgagcatcggcgccttgagccctgaagcccatgaagctcttgctattgcgatgaac
cgcttaggtggccgctcgaactcaggtgaaggtggtgaggatgcacgccgctttaatact
gaacgcaactctgcaattaaacagattgcctcggcacgctttggtgtcacggcgcattat
ctagttaatgccgatgtgttgcagattaaagtcgcccaaggggcaaaacccggtgaaggt
ggtcagttacccggccataaagtcagcgttgaaatcgccggactgcgtcatgcacgtcct
ggtgtgaccttgatttcaccgccgccgcaccacgatatttactctatcgaagatttagcc
cagctgattttcgacttgaagcaaatcaatactaaagcgctgatttcagtgaaacttgtg
tcagaacccggtgtgggcacgatcgccaccggcgtggccaaagcctatgcggacatgatc
acgatttcagggtatgacggcggcacaggtgctagcccaattacctcagtgaaatatgcg
ggcagtccatgggagctagggttagccgaggtgcatcaatcgctagtagaaaatggtcta
cgccataaaattcgcctgcaagtcgatggcggcttaaaaaccggtaccgatgtgattaaa
gccgcgttattgggcgccgaaagctttggttttggtactgtgcctatgatcgccctaggt
tgtaaatacctgcgtatttgccacttgaacaactgtgcgactggcgtagcaacgcaagat
aaaaacctgcgcgacaaccattaccatggtctgccagagcgagtgatgacttactttgag
tttgttgcacaggaagttcgtgaatggatggcgaccttaggggtgagcaagtttgaagac
ctcgtcggtcgcagcgaatggttatatgccctcgaaggccaaaccgcgaagcaacaaggc
ttagatctgtcaccgattttgtatcaacccaaagtgccagcaacctcgtcacgcacttgg
caagaaaccaatccaccggcggatttagggctgcttaaccagcatttattaaacgaatgc
caaagcgccgtcgataagggcgagagtttcgatgctgcttacagcatcaacaacaccgac
cgttccgttggcgcgacgttgtcaggctatatcgcgagcacactcggcgtcaaaggcacc
aaagcgccggtcaaactgagctttaacggcagtgccggccaaagctttggcgtgtggaac
agcccaggccttgagttaaaactctgcggcgatgccaacgactatgtgggtaaaggcatg
tctggcggccagattgtcatatacccgcctattggcagcccgttccaaagtgagcgcagc
gccattgtcggtaacacgtgtctttacggcgcgacgggcggcaagttcttcgccgcaggt
caagcgggcgagcgttttgcagtccgtaactctggggcgattgctgtggttgaagggctt
ggcgataacggctgcgaatacatgaccagcggcattgtggttgtccttggtaaaacaggg
gtgaacttcggcgctgggatgacaggcggttttgcctatgtgttcgatcaattcggccgc
ttcaatcgccgtgtgaatactgagcttgtcgatacacaaaaacttgaatcaccgatccat
caacaacatttaaaaggtctgattgaagcccacgtggccgaaacgggcagtgaacatgcc
aagatgatcttaagtgattttggtaactggttagattgcttcgtattagtaaaacctaaa
aatattgccgtggccgatctgctcaaattagagaaatcgagcccagaattagttgtaaaa
gcggggtaa
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