Shewanella oncorhynchi: RA178_18940
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Entry
RA178_18940 CDS
T09381
Name
(GenBank) aspartate aminotransferase family protein
KO
K00821
acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.11
2.6.1.17
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00220
Arginine biosynthesis
sog00300
Lysine biosynthesis
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01210
2-Oxocarboxylic acid metabolism
sog01230
Biosynthesis of amino acids
Module
sog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RA178_18940
00220 Arginine biosynthesis
RA178_18940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_18940
Enzymes [BR:
sog01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.11 acetylornithine transaminase
RA178_18940
2.6.1.17 succinyldiaminopimelate transaminase
RA178_18940
Amino acid related enzymes [BR:
sog01007
]
Aminotransferase (transaminase)
Class III
RA178_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WMB72471
UniProt:
A0AA50Q5S7
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All DBs
Position
complement(4268270..4269487)
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AA seq
405 aa
AA seq
DB search
MSVDMKLDRAQFDAVMVPNYAPAAVIPVRGEGSRVWDQEGNEFIDFAGGIAVNCLGHCHP
ALVNALKTQGEKLWHLSNVMTNEPALALATKLVNSTFADKVYFANSGAEANEAALKLARR
YALEKHGVEKDEIIAFDKAFHGRTFFTVSVGGQAAYSDGFGPKPQSITHLPFNDVAALEA
AVTDKTCAIMLEPLQGEGGIIDADPAFLKAVRELANKHNALVIFDEVQTGVGRTGELYAY
MGTEIVPDILTTAKALGGGFPIAAMLTTAEIAEHLKVGTHGSTYGGNPLACAIGNAVLDV
VNTPEVLDGVKHREQLLRDGLNKINEKYHVFSEVRGKGLLLGAVLNEQYQGRSRDFLVAS
VAEGLMSLMAGANVVRFAPSLVIPEADIAEGLARFERAVASIAAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgatatgaagttggaccgtgcccagtttgacgcagtgatggtgcctaattat
gcgcctgctgccgtgatccctgttcgtggcgaaggaagccgagtttgggaccaagagggc
aacgagtttatcgattttgctggcggtattgcggtaaattgcttaggtcactgtcatcct
gcccttgtgaatgccctaaagacacaaggtgaaaaattatggcatctgtcaaacgtaatg
acgaatgagccagccttagcattagcgactaaattagttaatagcacgtttgccgacaaa
gtgtattttgccaactctggcgccgaagccaacgaagccgcattaaaacttgcccgtcgt
tatgccttagaaaaacatggcgttgagaaagatgaaatcatagcgttcgataaagctttc
cacggccgtacattcttcaccgtcagtgtaggtggacaagctgcctattccgatggtttt
ggtcctaagccgcagagcattactcacctgccatttaacgatgttgccgccttagaagcc
gcagtgacggacaagacttgcgccatcatgcttgagccgctgcaaggcgagggcggtatt
attgatgccgatcctgcattcctaaaagccgtgcgtgaattggctaataagcacaatgca
ctagtcatttttgatgaagtccaaacgggtgtgggccgtactggtgaactgtacgcttac
atgggtactgaaatcgtgcctgacatcttaaccacagctaaagcgctcggtggtggtttc
cctattgcagctatgctgacaaccgctgaaattgccgagcatttaaaagtgggcactcac
ggttctacctacggtggtaacccgttagcctgcgctatcggtaatgctgtattagatgta
gtgaacacacctgaagtgttagatggcgtaaaacatcgcgagcagttattgcgtgatggt
ttgaacaaaatcaatgaaaaatatcatgttttttcagaagtacgcggtaaaggtttactc
ttaggggccgttcttaatgaacaataccaaggtcgttcacgcgactttttggtggcctct
gtcgctgaaggcttaatgagcctgatggcgggtgctaacgtggtgcgttttgctccttct
ctggtgatccctgaggcagatattgctgaaggtctagctcgttttgaacgtgctgtggcg
agcatagctgccgcctaa
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