Shewanella oncorhynchi: RA178_20190
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Entry
RA178_20190 CDS
T09381
Name
(GenBank) alanine--glyoxylate aminotransferase family protein
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00250
Alanine, aspartate and glutamate metabolism
sog00260
Glycine, serine and threonine metabolism
sog00630
Glyoxylate and dicarboxylate metabolism
sog00680
Methane metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
sog01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RA178_20190
09102 Energy metabolism
00680 Methane metabolism
RA178_20190
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RA178_20190
00260 Glycine, serine and threonine metabolism
RA178_20190
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_20190
Enzymes [BR:
sog01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
RA178_20190
2.6.1.45 serine---glyoxylate transaminase
RA178_20190
2.6.1.51 serine---pyruvate transaminase
RA178_20190
Amino acid related enzymes [BR:
sog01007
]
Aminotransferase (transaminase)
Class V
RA178_20190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WMB72700
UniProt:
A0AA50Q6C8
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Position
complement(4573225..4574358)
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AA seq
377 aa
AA seq
DB search
MLPAPRFTAFNPPRRILMGPGPSDVYPEVLAAQSRPTVGHLDPLFVGMMDELKSLIQYAF
KTKNEMTMAVSAPGSAGMETCFVNLVEPGEKVIVCRNGVFGERMRQNVERMGAIAVLVDN
EWGTPVDPAAVEAALKANPDAKFLAFVHAETSTGALSDAKTLCALAKTYGCLSIVDAVTS
LGGVELRVDEWGIDAIYSGSQKCLSCVPGLSPVSFSPAAVEKLKNRKTPVQSWFLDQSLV
MAYWTSAGGKRSYHHTAPVNALYALHESLRMLAAEGLENAWQRHHEMHLVLRAGLEKLGL
NFVVAEDSRLPQLNAIYIPEGVDDAAVRTRLLKDYNLEIGAGLGALAGKAWRIGLMGFGA
RRENVALCLKALEEVLN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaccagcaccgcgttttaccgcttttaatcctcctcgccgtattttaatgggccca
ggcccatcggatgtttatcccgaagtgcttgcggcgcagtcgagacctacggtcggtcat
ttagatccgctgtttgtgggcatgatggatgagcttaagagtctgatccaatacgccttc
aaaactaaaaacgaaatgaccatggcggtatcagcgccgggcagtgcgggcatggaaacc
tgtttcgttaacttagtcgagccgggtgagaaggtaattgtctgtcgtaacggtgtgttt
ggtgagcgtatgcgccaaaacgtcgagcgtatgggcgccattgccgtgctggtggacaat
gagtggggcacacctgttgatcctgcagcggttgaagctgcgctgaaagccaatcccgat
gccaaatttttagcctttgtgcacgccgaaacctcaactggcgccttgtccgatgccaaa
actctgtgcgcattagccaaaacctatggctgtttgagcatagttgatgcggtgacttcc
cttggcggcgttgagttaagagtcgatgaatggggcatagatgctatttattctggcagt
caaaagtgcctttcctgtgtaccgggtttatcgcccgtgtctttctcgcctgcagccgtc
gaaaaactcaagaatcgcaagaccccagtgcaaagttggttcctcgatcaaagcttagtg
atggcctattggaccagcgcgggaggcaaacgtagttaccatcacactgcgccagtgaat
gcgctttatgcacttcatgaatccctgcgtatgttagcggccgaaggcttagagaatgcg
tggcaacgccaccacgaaatgcatttagtgctgcgtgctgggcttgaaaagttagggctt
aactttgtggtggccgaagattcgcgcttgccacaactcaatgccatttatatccccgaa
ggcgttgatgatgccgctgtgcggactcgtttgcttaaagattataacctcgaaattggc
gccggccttggtgctcttgcgggcaaagcatggcgcattggccttatgggcttcggtgcc
cgtcgtgaaaatgtcgccttatgcctcaaggcattagaagaggtgttgaactaa
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