Shinella oryzae: K6301_03050
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Entry
K6301_03050 CDS
T08112
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
soj
Shinella oryzae
Pathway
soj00053
Ascorbate and aldarate metabolism
soj00520
Amino sugar and nucleotide sugar metabolism
soj00541
O-Antigen nucleotide sugar biosynthesis
soj01100
Metabolic pathways
soj01240
Biosynthesis of cofactors
soj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
K6301_03050
00520 Amino sugar and nucleotide sugar metabolism
K6301_03050
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
K6301_03050
Enzymes [BR:
soj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
K6301_03050
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Ldh_1_N
NAD_binding_10
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
UPA25202
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Position
620846..621832
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AA seq
328 aa
AA seq
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MNKVFVTGAAGFIGFHTALRLLERGEIVVGYDVVNDYYDPTLKYARLAELAKFEKFTFVR
GDISDKAAMEKVWSEQGPFKRVIHLAAQAGVRYSLENPYSYITSNCMGHVTVLEMCRHTE
GFEHLVYASSSSVYGGNKELPYSIQHDVNRPISLYAATKRSDELMSHCYSHLFGLKQTGL
RFFTVYGPWGRPDMALFIFAKAIAEGKKLPVFNGGQMKRDFTFIDDIVTGIVACLDNPPE
PGKVDPPARVFNIGNTRSEDLMDFIAIIEREMGRKADIEYLPMQPGDIEATYADVTETTE
AVGYRPTTSIDEGIPKFVSWFKQYHNIN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggtttttgtaacgggagctgcagggttcatcggctttcataccgcgcttcgc
ttgcttgaacgcggtgagattgtagtcggttatgatgttgtcaacgactactacgatccg
acgctcaagtatgcgcggctggcggaacttgcgaagttcgagaaattcacattcgtccga
ggcgatatctcggacaaggcggcgatggaaaaagtctggagcgagcagggaccgttcaag
cgcgttattcatctcgcagcgcaggcaggagtgcgctattcccttgagaatccctatagc
tatatcacaagcaactgcatgggccatgtcacggtactcgagatgtgccggcatactgaa
ggcttcgagcatcttgtctatgcgagttcaagttccgtgtatggggggaataaggaattg
ccttactcgatccagcacgacgttaaccgcccgatttcgctttatgcagcgacgaagcgc
tcagacgagttgatgagccattgctatagtcatttattcggcctgaagcagaccggcttg
cgcttcttcactgtctacggcccttggggccgacctgatatggcacttttcatttttgcc
aaggcaatcgccgaaggtaagaagttgcccgtttttaatggcgggcaaatgaagcgcgat
tttacattcattgacgacatcgttaccggcatcgtcgcctgcctggacaacccccctgag
cctggaaaggtcgatcctccagcccgggtgttcaatatcggcaatacgcgaagtgaagac
ctcatggactttattgcgatcattgaacgggaaatggggcgcaaggcagatatcgagtac
ttgccgatgcagcctggagacattgaagcaacgtacgccgatgtgacggagacaaccgag
gctgtcggctatcggccgacgaccagtatcgacgaaggcattccgaagttcgtttcttgg
ttcaaacaataccataatatcaactga
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