Shinella oryzae: K6301_03410
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Entry
K6301_03410 CDS
T08112
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
soj
Shinella oryzae
Pathway
soj00190
Oxidative phosphorylation
soj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
K6301_03410
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6301_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soj03019
]
K6301_03410
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
K6301_03410
Messenger RNA biogenesis [BR:
soj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6301_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
PLDc
Motif
Other DBs
NCBI-ProteinID:
UPA26199
LinkDB
All DBs
Position
700382..702508
Genome browser
AA seq
708 aa
AA seq
DB search
MASPERFINREFSWLQFNRRVLEETLNTAHPLLERVRFLSISAANLDEFFMVRVAGLEGQ
VRQGIAIRSPDGKTSAEQLDDILKEIDNLQMEQQASLAVLQQYLAKEDILIVRSVALTSD
DKVWLQQEFNQSIFPVLTPLSIDPAHPFPFIPNLGFSIGLQLESTMGKEPMTALLRLPVA
LDRFIRLPDAEGAIRYITLEDVVGLFIGRLFPGYIVRGSGTFRIIRDSDIEVEEEAEDLV
RFFETALKRRRRGSVIRIETDSEMPESLRRFVVGELNVPDNRVAVLPGLLALNTLSEIAK
APRNDLRFEPYNARFPERVREHAGDCFAAIREKDMVVHHPYESFDVVVQFLLQAARDPDV
LAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVV
FGFIELKTHAKMSMVVRREEGRLRTYCHLGTGNYHPVTAKIYTDLSFFSCNPTIANDMAN
IFNFITGYGEPEAGMKLAFSPYTLRPRILRHIDEEIAHAKNGAPAAIWMKMNSLVDPEII
DALYRASQAGVEVDLVVRGICCLRPQVPGLSDNIHVKSIVGRFLEHSRIFCFGNGHGLPS
DKALVYIGSADMMPRNLDRRVETLVPLINRTVHEQVLSQIMLGNLIDNQQSYEILPDGTS
RRMEVQPGAEPFNAQHYFMTNPSLSGRGEALKSSAPKAIAGWQGRRKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccggagcgcttcatcaaccgggaattctcctggctccagttcaaccgccgt
gttctcgaggaaacgctgaacaccgcccatccgctgctcgagcgcgtgcgcttcctgtcg
atctccgcggccaatctcgacgagttcttcatggtgcgcgtcgcgggcctcgaaggccag
gtgcggcagggcatcgccatccgcagccccgacggcaagacctcggccgagcagctcgac
gacatcctgaaggagatcgacaatctccagatggagcagcaggcctcgctcgccgtgctc
cagcagtacctcgccaaggaagacatcctcatcgtgcgctcggtggcgctgacgagcgac
gacaaggtctggctccagcaggagttcaaccagtcgatcttcccggtcctgaccccgctg
tcgatcgatccggcccacccgttcccgttcatccccaacctcggcttctccatcggcctc
caactggaaagcacgatgggcaaggagccgatgacggcgctgctgcgcctgccggtcgcg
ctcgaccgcttcatccgcctgccggatgccgagggcgccatccgctacatcacgctggag
gatgtggtcgggctgttcatcggccggctcttccccggttacatcgtgcgcggctcgggc
acgttccgcatcatcagagacagcgatatcgaggtggaggaagaggcggaagatctcgtg
cgcttcttcgagaccgcgctcaagcgccgccgccgcggatcggtgatccgcatcgagacc
gattccgaaatgccggaatcgctgcgccgcttcgtcgtcggcgaactcaacgtgccggat
aatcgcgtcgccgtcctgccgggcctgcttgccctcaacacgctgtcggagatcgccaag
gctccgcgcaacgacctgaggttcgagccctacaatgcgcgatttcccgaacgcgtccga
gagcacgccggagactgcttcgccgccatccgcgaaaaggacatggtcgtccaccacccc
tacgaaagcttcgacgtggtggtccagttccttctccaggctgcgcgcgatcctgacgtt
ctggcgataaagcagacgctctaccgcacctccaacgacagccccatcgtgcgcgcgctg
atcgatgccgccgaggccggcaagtcggtgacggcgctggtcgagctcaaggcccgtttc
gacgaggaggccaacatccgctgggcgcgcgacttggagcgcgccggcgtgcaggtcgtc
ttcggcttcatcgaattgaagacccacgccaagatgtcgatggtggtgcggcgcgaggag
ggcaggctgcgcacctattgccatctcggcacgggcaattaccacccggtcacggcgaag
atctacacggacctgtccttcttcagctgcaacccgaccatcgccaatgacatggcgaac
atcttcaacttcatcaccggctacggcgagcccgaggccggcatgaagctcgccttctcg
ccctatacgctgcgcccgcgcatcctgcgtcacatcgacgaggagatcgcgcatgcgaag
aacggcgcgccggcggcgatctggatgaagatgaattctcttgtggatcccgagatcatc
gatgcgctttaccgcgccagccaggcgggcgtggaagtggatctggtggtgcgcggcatc
tgctgcctgcgtccgcaggtgccgggcctttcggacaatatccacgtcaagtccatcgtc
ggccgcttcctcgagcactcccgcatcttctgcttcggcaacggccacgggcttccatcc
gacaaggcgctggtctatataggctccgcggatatgatgccgcgcaacctggaccggcgg
gtcgagacactcgtgcctctgatcaaccggacggtgcatgagcaggtactctcgcagatc
atgctgggcaatctcatcgacaaccagcagagctacgagattcttcccgacggaacgtcc
cggcgcatggaagtgcagcccggtgccgagccgttcaatgctcagcactacttcatgacc
aaccccagcctgtccggccggggcgaggccctgaagtcctcggcaccgaaggcgatcgcg
ggctggcaaggccgccgcaagaagtaa
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