Shinella oryzae: K6301_07875
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Entry
K6301_07875 CDS
T08112
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
soj
Shinella oryzae
Pathway
soj00240
Pyrimidine metabolism
soj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K6301_07875
Enzymes [BR:
soj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
K6301_07875
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
UPA26080
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All DBs
Position
1577806..1578732
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AA seq
308 aa
AA seq
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MTRPVSSLLPMQYSDEVAAAKARGAPIVALESTIITHGMPYPGNLEMARSVETIIRDNGA
VPATIAVIEGVLHIGLEAAQLEALAQTKGAMKVSRADMAFAIAERRTGATTVAATMIGAA
RAGIRVFATGGIGGVHRGAEETFDISADLEELARTGVIVVCAGPKAILDIPKTLEVLETR
GVPVVTYDSAIFPAFWSRDSGLKSPLTLNSPAAIANFQTVRDQLGVDGGMLIANPVPQAD
EIPREEMEIYITRALDNAERDEIAGKAVTPYLLDSLFHLTDGRSLKTNIALVENNARLAA
EIAVAMVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacccgtctcctccctcctgccgatgcagtattcggacgaagtcgccgccgcc
aaggcccgtggcgcgcccatcgtcgccctcgaatcgacgatcatcacgcatggcatgccc
tatccgggcaatctcgagatggcgcgcagcgtggagacgatcatccgcgacaacggcgcc
gtgccggccaccatcgccgtcatcgagggcgtgctgcatatcggcctggaagccgcccag
ctcgaagcgctggcgcagaccaagggcgcgatgaaggtatcgcgcgccgacatggcgttt
gccattgccgagcgccgcacgggcgcgaccacggtcgccgccacgatgatcggtgctgcg
cgcgccggcatcagggtctttgccaccggcggcatcggcggcgttcaccgcggcgcggaa
gaaaccttcgacatctcggccgaccttgaggaactcgcgcgcacgggcgtcatcgtcgtc
tgcgccggccccaaggcgatcctcgacatccccaagaccctggaagtgctggaaacgcgc
ggcgtgccggtcgtgacctatgacagcgccatcttcccggccttctggtcgcgcgattcg
gggctgaagagcccgctgacgctcaacagtccggcggcgatcgccaacttccagacggtg
cgcgaccagctcggcgtcgacggcggcatgctgatcgccaatccggtgccgcaggccgac
gagatcccgcgcgaggagatggaaatctacatcacccgtgcgctcgacaatgcagagcgc
gacgagatcgccggcaaggcggtcacgccctacctgctcgacagcctgttccacctgacc
gacggccgcagtctcaagacgaacattgcgctggtagagaacaatgcccgcctggcggca
gagatcgccgtcgcgatggtggcttga
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