Shinella oryzae: K6301_08575
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Entry
K6301_08575 CDS
T08112
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
soj
Shinella oryzae
Pathway
soj00860
Porphyrin metabolism
soj01100
Metabolic pathways
soj01240
Biosynthesis of cofactors
Module
soj_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
K6301_08575 (cobN)
Enzymes [BR:
soj01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
K6301_08575 (cobN)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
UPA23260
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Position
complement(1727644..1731384)
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AA seq
1246 aa
AA seq
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MHLLLAQKGTIADGKEAIDLGQTPGDILFLSAADTELASIAAAHRARGGDTRLRLASLAT
LSHPMSVDTYIERTARHARLIVIRALGGASYFRYVLEALLATAVANDIKLVALPGDDRPD
EGLIPFNSIEDADRRNLWAYLNEGGADNADRFLAYADAVVFGREKPAPATPLEKAGIWWP
GRGVVDVEEWRALAGDNIPTVAIAFYRAYVQSGETRPVEMMIDALAAEGIRALPLFVSSL
KEPVSIETVRAAFAEVRPEAVLNATSFAVSAPGAGRKPTVLDETGAPVLQVVFSGSSREA
WQASGQGLTARDLGMNVSLPEVDGRVLSRAVSFKAAARYDERVETNIIGLDPVEDRIRFV
AKLAAGWARLRRAAPAERRVALVMANYPNRDGRLGNGVGLDTPAGTMEVLRAMVAEGYAV
ADLPEDGDALIAHLMAGPTNAANDGREIRETLSLNLYKAFFASLPTSIQQEMTARWGTPE
DDPFVTGEVFALPLARFGETLVGIQPARGYNIDPKDTYHSPDLVPPHGYLAFYAFLRLHY
GAHAIVHMGKHGNLEWLPGKALALSEACYPEAVLGPVPHLYPFIVNDPGEGTQAKRRSAA
VIIDHLTPPLTRAETYGPLKDLEALVDEYYEASGGDPRRIRLLTKQILDLVRDIGLDSDA
GIAKSDGEEAALQKLDAYLCDLKEMQIRDGLHVFGVSPEGRLLTDLTVALARVPRGLGEG
GEASLQRAIAADALGETDFDPLDCIPSDPWTGPRPQILAGQSETPWRSKGDTVERIELLA
ARLVDGTLGCPAGWLATRAVLDVIETSIRPAVAACGPAEITALMRGLDGRFVEPGPSGAP
TRGRPDVLPTGRNFYSVDSRAVPTPAAWELGRKSAELLVTRYAQDHGEWPTSFGITAWGT
SNMRTGGDDIAQAMALIGVKPTWDMASRRVTGFEIIPPATLRHPRVDVTLRISGFFRDAF
PEQIALFDRAVRAVGALDEDDADNPIAARMRAEATALAARGASEAEAARQAGFRIFGAKS
GGYGAGLQTMMDEGLWTDRGDLADAWLDWGAHAYDGESDGVPMRERLEARMKSLQAVIQN
QDSREHDLLDSDEYYQFEGGMAAAAEHLSGRQPVMYHNDLSRPEKPVVRTLEDEIGRVVR
ARVVNPKWIDGVMRHGYKGAFEIAATVDLMFAFAATTGAVKDHHFEAAYQAYLLDERVRD
FLMEKNPAALAEMAARFAEAIDRRLWTPRSNSARFELDMLGARKAS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcctgctagcccagaagggcaccatcgccgacggcaaggaggcgatcgacctt
ggccagacgccgggcgatatcctcttcctctccgctgccgatacggaactggcctccatc
gccgccgcccaccgtgcgcgcggtggtgatacgcgccttcgtctcgccagcctcgcgacg
ctgtcgcatcccatgtccgtcgatacctatatcgagcgcacggcccggcacgcccggctc
atcgtcatccgcgcgctcggcggcgcgagctatttccgctacgtgctggaagccctgctg
gcgacggctgtcgccaacgatatcaagctcgtggcgctgccgggcgatgaccgtcccgat
gaggggctgatccccttcaacagcatcgaggatgccgaccgccggaacctctgggcctat
ctcaacgagggcggggcggacaatgccgaccgtttcctcgcctatgccgatgcggtggtg
tttggccgcgagaagccggcaccggcgacgccgctcgaaaaggccggcatctggtggccg
gggcgcggcgtggtggatgtcgaggagtggcgtgcgcttgcgggcgataacatccccacc
gtcgccatcgccttctaccgcgcctatgtccagagcggcgaaacacgtccggtcgaaatg
atgatcgatgcgctggcggcggagggcattcgggccctgccgctcttcgtctccagcctc
aaggagccggtttccatcgaaaccgtccgcgccgcctttgcggaggtccggccggaggcc
gtgctgaatgccacgagctttgccgtctccgcgcccggcgccggccgcaagccgacggtg
ctcgacgagaccggtgcgccggtgttgcaggtcgtcttctccggctcctcgcgcgaggcg
tggcaagcgtcggggcaggggctcacggcgcgcgatctcggcatgaacgtctcgctgccg
gaagtcgatggccgggttctgtcccgtgccgtctccttcaaggcggccgcgcggtacgac
gagcgcgtcgagaccaacatcatcggcctcgatccggtcgaggaccgcatccgtttcgtt
gcgaagctcgccgccgggtgggcgcggcttcggcgcgccgcgccggccgaacgccgggtc
gccctcgtcatggcgaactatcccaaccgcgatggccgcctcggcaacggcgtcggcctc
gatacgcccgccggcacgatggaagtgctgcgcgccatggtggcggaaggttatgcggtg
gcggacctgccggaggatggcgatgcgctgatcgcccatctcatggcgggccccaccaat
gcggccaatgacggccgtgaaatccgcgaaacgctttcgctgaatctttacaaggcattc
ttcgcttcgcttccgacatcgattcagcaggagatgaccgcccgctggggcacgccggaa
gacgacccctttgtgaccggcgaggtcttcgccctgccgctcgcccgtttcggcgagacg
ctcgtgggtatccagccggcacgcggctacaatatcgatccgaaagacacctaccactcg
ccggatctcgtgccgccgcatggttatctcgccttctacgctttcctgcgcctgcattac
ggcgcgcatgccatcgtgcatatgggcaagcacggcaatctcgaatggctgccgggcaag
gcgctggcgctgtcggaagcctgttacccggaggccgtgctcggccccgtgccgcatctc
tatcccttcatcgtcaacgatcccggcgaaggcacgcaggccaagcgtcgttccgcggcc
gtcatcatcgatcacctgacgccacctctgacgcgtgccgaaacctacggcccgctgaag
gacctcgaagccctcgtcgacgaatattacgaggcctccggcggcgatccgcggcgcatc
aggctgctgacgaagcagatcctcgatctggtgcgcgatatcggcctcgacagcgacgcc
ggcatcgcaaagtcggacggcgaggaagccgcgctgcaaaagctcgacgcctatctctgc
gacctcaaggaaatgcagatccgcgatggcctgcacgtcttcggcgtctcgcccgaaggg
cgccttctgacggacctgaccgttgcgctggcccgcgtgccgcgcggcctgggcgagggc
ggcgaggcgagcttgcagcgtgccatcgcagccgatgccctgggcgagacggatttcgac
ccgctcgactgcatcccgtccgatccatggaccggcccgcggccgcagatccttgccggg
caatccgaaacgccctggcgcagcaagggcgatacggtggagcgcatcgaactgctcgcg
gcaaggctggtggatggcacattgggctgcccggccggctggctcgccacgcgcgcggtg
ctcgatgtcatcgagacatccatccgccctgccgttgcggcctgcggccccgcggaaatc
acggcgctgatgcgcggcctggacgggcgtttcgtcgagcccggcccctccggcgcgccg
acacgcgggcggccggatgttctgccgaccgggcgaaacttctattccgtcgacagccgc
gcggtgccgacgccggcggcctgggagcttggccgcaagtccgccgaactcctcgtcacc
cgttatgcgcaggatcacggcgaatggccgacctccttcggcatcaccgcctggggcacc
tccaacatgcgcaccggcggcgatgatatcgcgcaggccatggcgctgatcggcgtgaag
ccgacatgggacatggcttcgcgccgcgtcaccggcttcgagatcattccaccggcgacg
ctgcgtcatccgcgcgtcgacgtgaccttgcgcatttccggcttcttccgcgatgccttc
cccgaacagatcgcgcttttcgaccgcgccgtgcgggccgtgggtgccctcgacgaggac
gatgcggacaatccgattgccgcccgtatgcgggcggaagccacagcgcttgcggcccgg
ggtgcctccgaagcggaggccgccagacaggcgggcttccgcatcttcggcgcgaaatca
ggcggttatggcgctggcctgcagaccatgatggacgaaggcctgtggacggaccggggc
gacctggccgatgcctggctcgactggggcgcacacgcctatgacggcgagagcgacggc
gtgccgatgcgcgagcggctggaggcccgcatgaagagccttcaggccgtcatccagaac
caagacagccgcgagcacgatcttctcgacagcgacgaatactaccagttcgagggcggc
atggcggcggcggcggagcacctgtccggccgccagcccgtcatgtaccacaacgacctg
tcgcggccggaaaagccggtcgtgcgcacgctggaagacgagatcggccgcgtcgtgcgc
gcccgcgtggtcaatccgaagtggatcgacggtgtcatgcgccatggctacaagggcgcg
ttcgagatcgccgcaaccgtcgatttgatgttcgccttcgccgccacgaccggggcggtc
aaggaccaccacttcgaggccgcctatcaggcttatctgctggacgagcgcgtgcgcgat
ttcctgatggagaagaacccggcagcacttgccgagatggccgcacgcttcgccgaggcc
atcgaccggcggctgtggaccccgcgctcgaattccgcgcgtttcgaactggatatgttg
ggcgcccgcaaggcgtcctga
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