Shinella oryzae: K6301_09905
Help
Entry
K6301_09905 CDS
T08112
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09905
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_09905
Transporters [BR:
soj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
K6301_09905
Antimicrobial resistance genes [BR:
soj01504
]
Gene variants
Tetracycline resistance genes
Transporters
K6301_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_5
TRI12
LacY_symp
MFS_4
FPN1
Motif
Other DBs
NCBI-ProteinID:
UPA23510
LinkDB
All DBs
Position
complement(2017867..2019120)
Genome browser
AA seq
417 aa
AA seq
DB search
MVDARSTRRGLFLVFMIMFLDVIGIAIVVPVLPTYLHELTGDDISQAAIDGGWLLLVYAG
MQFLFAPLIGNLSDRFGRRPVLLACILTFAIDNLICALATSYWMLFAGRVLAGISGASFS
TAAAFIADVSDDETRAKNFGLMGIAFGTGFVIGPVIGGVLGEFGPRIPFYGAAAIAFLNF
VAACILLPESLAPKNRRRFELARANPLGALLQMRNHPGVLWVGVVLFCYGLAHAVYPAVW
PFVAALRYGWSEGQIGLSLGVFGIGGALVMGFVLPRIVPRIGEYRTAVVGICFSVLGLCG
YAAAWQGWMVYVVIVLTALESLADPPLRSIAAARVPPSAQGELQGALTSISSITTVIGPL
LFTQAFSYFTGPKAPVTFAGAPYALAAAILFIGLIVFITTLRGAGAGPKAKTTPETA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgccaggtccacccggcgcgggctctttctcgtcttcatgatcatgttcctc
gacgtgatcggcatcgccatcgtcgtgccggtgctgcccacctatctgcacgaactgacg
ggcgacgatatcagccaggcggcaatcgacggcggctggctgctgctcgtctatgccggc
atgcagttcctcttcgcgccgctcatcggcaatctctcggatcgtttcgggcgccggccg
gtgctgctggcctgcatcctcaccttcgccatcgacaacctgatctgcgcgctggcgacg
agctactggatgctgtttgccggccgtgtgctcgcgggcatcagcggtgcgagtttctcc
accgccgccgccttcatcgccgatgtctccgacgacgagacgcgggcgaagaatttcggc
ctgatgggcatcgcgttcggaaccggcttcgtgatcggccccgtcatcggcggcgtgctc
ggggaattcggcccgcgcatccccttctacggcgccgccgcgatcgccttcctcaacttc
gtcgccgcctgcatcctgctgccggaaagcctcgcgccgaagaaccgccgccggttcgaa
ctcgcccgcgccaatccgctcggcgcgctgctgcagatgcgcaaccatcccggcgtgctg
tgggtgggcgtcgtgctgttctgctacgggctggcgcatgccgtctatccggcggtctgg
cccttcgtcgccgccctgcgctacggttggagcgaaggccagatcggcctgtcgctcggc
gtcttcggcatcggcggggcgctggtcatgggcttcgtgctgccgcgcatcgtgccgagg
attggcgaataccgcacggcggtcgtcggcatctgcttttccgtcctcggcctttgcggc
tacgccgcggcctggcagggctggatggtctatgtggtgatcgtgctgacggcgctcgaa
agccttgccgatccgccgctacgctcgattgcggccgcacgcgttccgccgtccgcgcag
ggcgagttgcagggcgcgctcaccagcatatccagcatcaccaccgtcatcggtccgctg
cttttcacccaggccttcagctacttcaccggcccgaaggcgccggtcacctttgccggc
gcgccctatgcgctggcggcagcgatcctgttcatcgggctcatcgtcttcatcacgacg
ttgcgcggcgctggcgcgggcccgaaggcgaaaacgacgccggaaacggcctga
DBGET
integrated database retrieval system
