KEGG   Shinella oryzae: K6301_12000
Entry
K6301_12000       CDS       T08112                                 
Name
(GenBank) sarcosine oxidase subunit alpha
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
soj  Shinella oryzae
Pathway
soj00260  Glycine, serine and threonine metabolism
soj01100  Metabolic pathways
Module
soj_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:soj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    K6301_12000
Enzymes [BR:soj01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     K6301_12000
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     K6301_12000
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 DAO NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C GIDA HI0933_like Thi4 Pyr_redox FAD_binding_3 Fer2_BFD Lycopene_cycl 3HCDH_N NAD_binding_7
Other DBs
NCBI-ProteinID: UPA23894
LinkDB
Position
complement(2456756..2459749)
AA seq 997 aa
MSGANRIAGQGRLTPAKTARFTFDGKTYHALEGDTVASALLANGVHLVGRSFKYHRPRGI
LSAGPEEPNALIDVSRDAARRQPNVRAPVQEVFDGMKVESQNRWPSLAFDIGGVNNLLSP
FFAAGFYYKTFMWPKAAWEKVYEPFIRKAAGLGVSPTEDDPDHYANRYAHCDVLVAGAGV
AGLSAALAAAEAGARVILVDEQPEVGGALHFDTSVKIDGQNGYDWAQAMAAKLKAMENVT
VLTRTTAFGYYNHNFVGLVERVTDHLPKPDKKLPRERLWQVRAKRVILATGSIERHMVFA
NNDRPGIMLASAARTYLNHFGVAVGRKVGVYTASDSAYEAAFDLKRAGVTIAAIVDNREK
PGEAVLAEARKLGIEVLTGHSVVDTKGKLRVSAMSVARNGGGSARWIPIDALLMSAGWTP
SVHLFSQSRGKVAYDAASGRFLPGTYAQDCLSVGSCNGTDGLQATIEESLAAGELMARAT
GNENGAKVELRGESAFEWTGGMAGSAEGAGVDTTVKAFVDFQNDVCAKDIRLAVREGMHS
IEHIKRFTTNGMATDQGKLSNIHGLAIASEVLNREIPKIGLTTFRAPYTPVTFGALISHS
RGALFDPARKTPMHGWEEAHGAVFEDVGNWKRAWYYPRSGETMHDAVNRECRTVRNVAGL
FDASTLGKIEVVGPDAEVFMNLMYTNAWDTLKPGRCRYGIMLREDGFVYDDGVVGRLSQD
RFHVTTTTGGAPRVMHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREILEPLVEG
IDISNEAFPHMSVREGKICGVPTRLFRMSFTGEAGYEVNVPADYGQAVWEAIWARAEPLG
ACAYGTETMHVLRAEKGYIIVGQDTDGTVTPHDASLSWAVSKKKTDFVGIRGLKRPDLVK
EGRKQLVGLLTKDPNVVLEEGAQIVADPNQPKPMTMLGHVTSSYWSENCGRSIALALVAG
GQARLGQTLYVPMPDRTIAVEVSDMVFVDKEGGRLNG
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgagcggcgccaatcgcattgccggtcagggccgcctgacgcccgccaagacagcgcgt
ttcaccttcgacggaaagacctatcacgcgcttgagggcgataccgtcgcctccgcgctg
ctcgccaacggcgttcatctggttggccgttcgttcaagtaccatcgtccgcgcggcatt
ctttcggccggcccggaagagcccaatgcactgatcgatgtctcccgcgatgccgcgcgc
cgccagccgaacgtccgcgcgcccgtgcaggaagtcttcgacggcatgaaggtggaatcg
cagaaccgctggccttcgctcgctttcgatatcggtggcgtgaacaacctgctgtcgccg
ttcttcgctgccgggttctactacaagaccttcatgtggccgaaggccgcctgggagaag
gtctacgagcccttcatccgcaaggccgccggcctcggcgtgtcgccgacggaagacgat
cccgaccattacgccaaccgttacgcgcattgcgacgtgctggttgccggtgccggcgtc
gcgggcctttccgccgcgcttgctgcggctgaagcgggtgcccgcgtcatcctagtggac
gagcagccggaagtcggcggtgcgctgcacttcgacacctccgtcaagatcgatggccag
aacggttacgactgggcgcaggcgatggcggccaagctgaaggcgatggagaacgtcacc
gttctcacccgcacgacggccttcggctactacaaccacaatttcgtcggcctcgtcgag
cgcgtcaccgatcatctccccaagccggacaagaagctgccgcgcgagcgtctttggcag
gtccgcgccaagcgcgtcattctcgcgacgggttcgatcgagcgccacatggtgttcgcc
aacaacgaccgtccgggcatcatgctcgcctcggccgcgcgcacctatctcaaccatttc
ggcgtcgccgtcggccgcaaggtcggcgtctatacggcaagcgattctgcctatgaggcc
gccttcgacctgaagcgggcgggcgtcaccatcgccgccatcgtcgataaccgcgagaag
cccggcgaggccgtcctggccgaagcccgaaagctcggaattgaggttctgaccggtcat
tcggtcgtcgacaccaaggggaagctgcgcgtctccgccatgtcggtcgcccgcaacggc
ggcggctcggcgcgctggatccccatcgacgcgcttttgatgtcggccggctggacgccc
tccgtgcatctcttctcgcagtcgcgcggcaaggtggcctatgacgccgcttccggccgg
ttcctgccgggaacctatgcgcaagattgcctgtcggtcggttcgtgcaacggcacggac
gggcttcaggcgaccatcgaggaatcgctggctgccggcgagcttatggcacgtgccacc
ggcaacgaaaatggcgccaaggtcgagcttcgtggcgaaagcgccttcgaatggaccggc
ggcatggcaggtagtgcggaaggcgccggggtcgacacgacggtcaaggccttcgtcgat
ttccagaacgacgtctgtgccaaggatatccgcctcgctgtacgcgaaggcatgcactcg
atcgagcacatcaagcgcttcaccaccaacggcatggcgacggaccagggcaagctgtcc
aacatccacggccttgccatcgcgtccgaagtgctgaaccgtgagatcccgaagatcggc
ctcacgaccttccgcgcgccctatacgcccgtcaccttcggtgcgctgatcagccattcg
cgcggtgcgcttttcgacccggcccgcaagacgcccatgcatggctgggaagaagcgcat
ggcgccgtcttcgaggacgtcggcaactggaaacgtgcctggtactatccgcgttcgggc
gagacgatgcacgatgcggtcaaccgcgagtgccgcacggtgcgtaatgtcgccggtctc
ttcgacgcctccacgctcggcaagatcgaagtcgtcggtccggatgccgaagtgttcatg
aacctcatgtacaccaatgcctgggacacgctgaagcccggccgttgccgctatggcatc
atgctgcgcgaagacggcttcgtctatgacgacggtgtcgtcggccgcctgtcgcaggat
cgcttccacgtcaccaccacgacgggcggcgcgccgcgcgtcatgcaccacatggaagac
tatctccagacggaattcccgcatctcaaggtgtggctgacatcgaccaccgaacagtgg
gcggttattgcggtccagggcccgaaggcgcgcgaaatcctcgagccgctggtcgaaggc
atcgatatctcgaacgaagccttcccgcatatgagcgtgcgtgaaggcaagatctgcggc
gtgccgacccggctcttccgcatgtccttcaccggcgaagcgggctacgaagtcaacgtt
cccgccgattacggccaggctgtctgggaggccatctgggcacgggcggagccgctcggc
gcctgcgcctacggcaccgagaccatgcacgtactgcgcgccgagaagggctacatcatc
gtcggccaggatacggacggcacggtcacgccgcacgacgccagcctcagctgggccgtt
tccaagaagaagacggatttcgtcggcatccgcggcctcaagcggccggatctcgtcaag
gaaggccgcaagcagcttgtcggcctgctgacgaaggacccaaacgtggtgctggaggag
ggggcgcagatcgttgccgatccgaaccagcccaagcccatgaccatgctcggccatgtc
acgtcgtcctactggtcggagaattgcggccggtcgatcgccctggcgctggtcgccggt
ggtcaggcccgcctgggccagacgctctacgtgccgatgccggaccgtaccatcgcggtc
gaggtcagcgacatggtctttgtcgacaaggaaggaggacgcctcaatggctga

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