Shinella oryzae: K6301_12000
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Entry
K6301_12000 CDS
T08112
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
soj
Shinella oryzae
Pathway
soj00260
Glycine, serine and threonine metabolism
soj01100
Metabolic pathways
Module
soj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K6301_12000
Enzymes [BR:
soj01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
K6301_12000
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
K6301_12000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
Pyr_redox_3
AlaDh_PNT_C
GIDA
HI0933_like
Thi4
Pyr_redox
FAD_binding_3
Fer2_BFD
Lycopene_cycl
3HCDH_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UPA23894
LinkDB
All DBs
Position
complement(2456756..2459749)
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AA seq
997 aa
AA seq
DB search
MSGANRIAGQGRLTPAKTARFTFDGKTYHALEGDTVASALLANGVHLVGRSFKYHRPRGI
LSAGPEEPNALIDVSRDAARRQPNVRAPVQEVFDGMKVESQNRWPSLAFDIGGVNNLLSP
FFAAGFYYKTFMWPKAAWEKVYEPFIRKAAGLGVSPTEDDPDHYANRYAHCDVLVAGAGV
AGLSAALAAAEAGARVILVDEQPEVGGALHFDTSVKIDGQNGYDWAQAMAAKLKAMENVT
VLTRTTAFGYYNHNFVGLVERVTDHLPKPDKKLPRERLWQVRAKRVILATGSIERHMVFA
NNDRPGIMLASAARTYLNHFGVAVGRKVGVYTASDSAYEAAFDLKRAGVTIAAIVDNREK
PGEAVLAEARKLGIEVLTGHSVVDTKGKLRVSAMSVARNGGGSARWIPIDALLMSAGWTP
SVHLFSQSRGKVAYDAASGRFLPGTYAQDCLSVGSCNGTDGLQATIEESLAAGELMARAT
GNENGAKVELRGESAFEWTGGMAGSAEGAGVDTTVKAFVDFQNDVCAKDIRLAVREGMHS
IEHIKRFTTNGMATDQGKLSNIHGLAIASEVLNREIPKIGLTTFRAPYTPVTFGALISHS
RGALFDPARKTPMHGWEEAHGAVFEDVGNWKRAWYYPRSGETMHDAVNRECRTVRNVAGL
FDASTLGKIEVVGPDAEVFMNLMYTNAWDTLKPGRCRYGIMLREDGFVYDDGVVGRLSQD
RFHVTTTTGGAPRVMHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREILEPLVEG
IDISNEAFPHMSVREGKICGVPTRLFRMSFTGEAGYEVNVPADYGQAVWEAIWARAEPLG
ACAYGTETMHVLRAEKGYIIVGQDTDGTVTPHDASLSWAVSKKKTDFVGIRGLKRPDLVK
EGRKQLVGLLTKDPNVVLEEGAQIVADPNQPKPMTMLGHVTSSYWSENCGRSIALALVAG
GQARLGQTLYVPMPDRTIAVEVSDMVFVDKEGGRLNG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccaatcgcattgccggtcagggccgcctgacgcccgccaagacagcgcgt
ttcaccttcgacggaaagacctatcacgcgcttgagggcgataccgtcgcctccgcgctg
ctcgccaacggcgttcatctggttggccgttcgttcaagtaccatcgtccgcgcggcatt
ctttcggccggcccggaagagcccaatgcactgatcgatgtctcccgcgatgccgcgcgc
cgccagccgaacgtccgcgcgcccgtgcaggaagtcttcgacggcatgaaggtggaatcg
cagaaccgctggccttcgctcgctttcgatatcggtggcgtgaacaacctgctgtcgccg
ttcttcgctgccgggttctactacaagaccttcatgtggccgaaggccgcctgggagaag
gtctacgagcccttcatccgcaaggccgccggcctcggcgtgtcgccgacggaagacgat
cccgaccattacgccaaccgttacgcgcattgcgacgtgctggttgccggtgccggcgtc
gcgggcctttccgccgcgcttgctgcggctgaagcgggtgcccgcgtcatcctagtggac
gagcagccggaagtcggcggtgcgctgcacttcgacacctccgtcaagatcgatggccag
aacggttacgactgggcgcaggcgatggcggccaagctgaaggcgatggagaacgtcacc
gttctcacccgcacgacggccttcggctactacaaccacaatttcgtcggcctcgtcgag
cgcgtcaccgatcatctccccaagccggacaagaagctgccgcgcgagcgtctttggcag
gtccgcgccaagcgcgtcattctcgcgacgggttcgatcgagcgccacatggtgttcgcc
aacaacgaccgtccgggcatcatgctcgcctcggccgcgcgcacctatctcaaccatttc
ggcgtcgccgtcggccgcaaggtcggcgtctatacggcaagcgattctgcctatgaggcc
gccttcgacctgaagcgggcgggcgtcaccatcgccgccatcgtcgataaccgcgagaag
cccggcgaggccgtcctggccgaagcccgaaagctcggaattgaggttctgaccggtcat
tcggtcgtcgacaccaaggggaagctgcgcgtctccgccatgtcggtcgcccgcaacggc
ggcggctcggcgcgctggatccccatcgacgcgcttttgatgtcggccggctggacgccc
tccgtgcatctcttctcgcagtcgcgcggcaaggtggcctatgacgccgcttccggccgg
ttcctgccgggaacctatgcgcaagattgcctgtcggtcggttcgtgcaacggcacggac
gggcttcaggcgaccatcgaggaatcgctggctgccggcgagcttatggcacgtgccacc
ggcaacgaaaatggcgccaaggtcgagcttcgtggcgaaagcgccttcgaatggaccggc
ggcatggcaggtagtgcggaaggcgccggggtcgacacgacggtcaaggccttcgtcgat
ttccagaacgacgtctgtgccaaggatatccgcctcgctgtacgcgaaggcatgcactcg
atcgagcacatcaagcgcttcaccaccaacggcatggcgacggaccagggcaagctgtcc
aacatccacggccttgccatcgcgtccgaagtgctgaaccgtgagatcccgaagatcggc
ctcacgaccttccgcgcgccctatacgcccgtcaccttcggtgcgctgatcagccattcg
cgcggtgcgcttttcgacccggcccgcaagacgcccatgcatggctgggaagaagcgcat
ggcgccgtcttcgaggacgtcggcaactggaaacgtgcctggtactatccgcgttcgggc
gagacgatgcacgatgcggtcaaccgcgagtgccgcacggtgcgtaatgtcgccggtctc
ttcgacgcctccacgctcggcaagatcgaagtcgtcggtccggatgccgaagtgttcatg
aacctcatgtacaccaatgcctgggacacgctgaagcccggccgttgccgctatggcatc
atgctgcgcgaagacggcttcgtctatgacgacggtgtcgtcggccgcctgtcgcaggat
cgcttccacgtcaccaccacgacgggcggcgcgccgcgcgtcatgcaccacatggaagac
tatctccagacggaattcccgcatctcaaggtgtggctgacatcgaccaccgaacagtgg
gcggttattgcggtccagggcccgaaggcgcgcgaaatcctcgagccgctggtcgaaggc
atcgatatctcgaacgaagccttcccgcatatgagcgtgcgtgaaggcaagatctgcggc
gtgccgacccggctcttccgcatgtccttcaccggcgaagcgggctacgaagtcaacgtt
cccgccgattacggccaggctgtctgggaggccatctgggcacgggcggagccgctcggc
gcctgcgcctacggcaccgagaccatgcacgtactgcgcgccgagaagggctacatcatc
gtcggccaggatacggacggcacggtcacgccgcacgacgccagcctcagctgggccgtt
tccaagaagaagacggatttcgtcggcatccgcggcctcaagcggccggatctcgtcaag
gaaggccgcaagcagcttgtcggcctgctgacgaaggacccaaacgtggtgctggaggag
ggggcgcagatcgttgccgatccgaaccagcccaagcccatgaccatgctcggccatgtc
acgtcgtcctactggtcggagaattgcggccggtcgatcgccctggcgctggtcgccggt
ggtcaggcccgcctgggccagacgctctacgtgccgatgccggaccgtaccatcgcggtc
gaggtcagcgacatggtctttgtcgacaaggaaggaggacgcctcaatggctga
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