KEGG   Shinella oryzae: K6301_17560
Entry
K6301_17560       CDS       T08112                                 
Symbol
putA
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
soj  Shinella oryzae
Pathway
soj00250  Alanine, aspartate and glutamate metabolism
soj00330  Arginine and proline metabolism
soj01100  Metabolic pathways
soj01110  Biosynthesis of secondary metabolites
Module
soj_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:soj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    K6301_17560 (putA)
   00330 Arginine and proline metabolism
    K6301_17560 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:soj03000]
    K6301_17560 (putA)
Enzymes [BR:soj01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     K6301_17560 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     K6301_17560 (putA)
Transcription factors [BR:soj03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    K6301_17560 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH CoA_trans
Other DBs
NCBI-ProteinID: UPA27949
LinkDB
Position
pZ25:282012..285716
AA seq 1234 aa
MQNSPAASASPSGEVFPPFSHFAPPIREQSELRRAITAAYRRPETECLPPLVAAARVSER
QRYDIRSTARTLIEALRAKHKGTGVEGLVQEYSLSSQEGVALMCLAEALLRIPDTDTRDA
LIRDKIAEGDWTSHIGGGKSMFVNAATWGLVVTGKLTSTVNDRGLSAALTRLIARAGEPV
IRRGVDMAMRMMGEQFVTGETIEEALKRSKPLEARGFRYSYDMLGEAATTAADAERYYRD
YEKAIHAIGKASGGRGIYDGPGISIKLSALHPRYVRAQAERVMSELLPKVKALAAIAKSY
DIGLNIDAEEADRLELSLDLLESLCLDADLKGWNGLGFVVQAYGKRCPFVLDYIIDLARR
AGRRIMVRLVKGAYWDAEIKRAQLEGLEGFPVYTRKIYTDVAYVACARKLLAAPDAVFPQ
FATHNAQSLATIYQLAGPDFSVGKYEFQCLHGMGEPLYDEVVGKDKLDRPCRIYAPVGTH
ETLLAYLVRRLLENGANSSFVNRISDPKVSVESLIADPVDIVAAMPVVGAPHDQIALPDA
LFGKARANSKGLDLSNETTLAELAGELAGTAAQSWHAAPLLADGASDGETSDVLNPADHR
DVVGRVTEIRPEDAERIVGVAADNVAAWSGVSPAERAACLDRAADIMEARIEPLMGIIMR
EAGKSAANAIGEVREAVDFLRYYAEQARRTLGPSHLPLGPVVCISPWNFPLAIFTGQVAA
ALVAGNAVLAKPAEETPIIAHESVKILHEAGVPVGALQFVPGAGRVGAALVGAAKTAGVM
FTGSTEVARLIQAQLAERLSAGGKPIPLIAETGGQNGMIVDSSALAEQVVGDVIASAFDS
AGQRCSALRVLCLQDDVADRTLTMLKGALNELTLGRTDCLNVDIGPVITAEARDGIVKHI
EHMRSLGNKVEQQPLPAGTENGTFVAPTIIELKTLADLKREVFGPVLHVIRFRRADLDRL
IDDINASGYGLTFGLHTRLDETIAHVTSRIKVGNVYVNRNIIGAVVGVQPFGGRGLSGTG
PKAGGPLYIGRLVQKAPVPPQQDSVHTDPALRDFITWLDREGKTDEGETARSFANRSALG
LERELTGPVGERNIYALHPRGRVLLVPKTETGLLRQVAAALATGNQIVIDHVEALKTAIA
DLPAAVAARLSWSTDWTKDGPFAGALVEGDAADIQRANARIAGLPGPLVLVQAATTDELV
ADPEAYCLNWLLEEVSTSINTAAAGGNASLMAIG
NT seq 3705 nt   +upstreamnt  +downstreamnt
atgcagaactctccagccgcttccgcttccccctccggcgaagtctttccacccttttcg
cacttcgcgccgcccattcgcgagcaaagcgaattgcgtcgggcgatcaccgcagcctat
cgccggcctgagaccgagtgcctgccgccgctcgtggccgccgcgcgtgtttccgaacgc
cagcgctatgacatccgcagcaccgcccgcacgctgatcgaggcgctgcgcgccaagcac
aagggcacgggcgtcgaggggctggtgcaggaatattcgctgtcgagccaggaaggcgta
gcgctgatgtgccttgccgaggcgttgctgcgcattcccgatacggacacgcgggatgcg
ctgatccgcgacaagatcgccgaaggggactggacctcccatatcggcggcggcaagtcg
atgttcgtcaacgcggcgacctggggcctcgtcgtcaccggcaagcttacctccacggtg
aacgaccgcggcctgtccgccgccctcacccggcttatcgcgcgcgccggcgaaccggtc
atccgccgcggcgtcgacatggccatgcgcatgatgggcgagcagttcgtcaccggcgag
accatcgaggaagcgctgaagcgctccaagccgctcgaggcgcgcggcttccgctattcc
tacgacatgctgggcgaggccgcgaccaccgccgcggacgccgagcgctactaccgcgat
tacgagaaggccatccatgccatcggcaaggcctccggcggacgcggcatctatgacggt
cccggcatctccatcaagctatcggcgctgcacccgcgctacgtgcgtgcccaggccgag
cgcgtcatgagcgagctcttgcccaaggtgaaggcgctcgccgccatcgccaagagctac
gacatcggcctcaacatcgacgccgaggaagcagaccgcctggaactgtcgctcgatctg
ctcgaaagcctgtgcctggatgcggacctcaagggctggaacggcctgggcttcgtggtg
caggcctatggcaagcgatgccccttcgtgctcgattacatcatcgacctcgcccgccgc
gccggccgtcgcatcatggtgcgcctcgtcaagggcgcctattgggatgccgagatcaag
cgcgcacagctcgagggcctcgagggtttcccggtctatacgcgcaagatctacacggac
gtcgcctacgtcgcctgcgcccgcaagctgctggcagcgccggacgccgtcttcccgcag
ttcgccacgcacaatgcgcagagcctcgccaccatctaccagctcgccggcccggatttt
tccgtcggcaagtacgagttccagtgcctgcacggcatgggcgagccgctctatgacgag
gtggtcggaaaggacaagctggaccgcccctgccgcatctatgcgccggtcggcacccat
gagacgctgcttgcctatctcgtgcgccgcctgctcgaaaacggcgccaactcttccttc
gtcaaccgcatctccgatccgaaggtttcggtggaatcgctgattgctgatcccgtcgat
atcgtcgcggcgatgccggtggtcggtgcaccgcatgaccagatcgccctgcccgacgcc
ctgttcggcaaggcccgcgcaaattcgaaggggctcgacctttccaacgagacgacactt
gcggagcttgccggcgaactcgcgggaaccgcagcacaatcgtggcatgccgcaccgctg
ctggccgacggcgccagcgacggcgaaacgagcgacgtgctgaacccggcggatcatcgc
gacgtggtcggccgtgtcaccgaaatccggccggaggatgcggaacgcatcgttggcgtc
gcggcggacaatgtcgccgcctggtccggcgtttcgccggccgagcgtgccgcctgcctg
gaccgtgcggctgacatcatggaggcccgtatcgaaccgctaatgggcatcatcatgcgc
gaagccggaaagtcggcggcgaacgccatcggcgaggtgcgcgaggcggtcgatttcctg
cgctattatgccgagcaggcgcgccgtacgctgggcccgtcacatctgccgctcggcccc
gtcgtctgcatcagcccgtggaacttcccgctcgccattttcaccgggcaggttgcggcc
gccctggtggcgggcaacgcggttctcgccaagccggccgaggaaacgccgatcatcgcg
catgaaagcgtgaagatcctgcacgaggccggtgtccccgtcggcgcgctgcaattcgtg
cccggcgcaggccgcgtcggcgcagcccttgtcggtgcggcgaagacggccggcgtcatg
ttcaccggttcgaccgaagtcgcccgcctcatccaggcgcagcttgccgaacgtctctcg
gccggcggcaagccgatcccgctgatcgccgaaaccggcggccagaacggcatgatcgtc
gattcctcggcacttgccgaacaggtcgtcggcgatgtcatcgcatcggccttcgacagc
gccggccagcgctgctcggcgctccgggtgctctgccttcaggacgatgttgcggaccgc
acgctgaccatgctgaagggcgcgctcaacgaactgacgcttgggcgcaccgactgcctc
aatgtcgatatcggccccgtcatcacggccgaggcccgcgacggcatcgtcaagcacatc
gagcatatgcgcagcctcggcaacaaggtggagcagcaaccgctgccggccggcacggaa
aacggcaccttcgtcgcgccgaccatcatcgagctgaaaacgcttgccgatctcaaacgc
gaagtgttcggcccggtcctgcatgtcatccgcttccggcgcgccgatctcgaccggctg
atcgacgatatcaacgcctccggctacggcctgacgttcggcctgcacacgcgcctcgac
gagacgatcgcgcatgtcacgagccgcatcaaggtcggcaacgtctacgtcaaccgcaac
atcatcggcgcggtggtcggcgtgcagcccttcggcgggcgcggcttgtccggcaccggc
cccaaggccggcggtccgctctatatcggccgcctcgtgcagaaggcccccgtgccgccg
cagcaggattcggtgcataccgatccggcgctcagggatttcatcacctggctcgaccgc
gagggcaagaccgacgagggcgagacggcccgcagcttcgccaaccgctccgcgctcggc
cttgagcgggaactgaccgggcccgtcggtgaacgcaacatctatgcgctgcatccgcgc
ggccgcgtgctgctcgttccgaagaccgaaaccggccttttgcgtcaggtggccgccgca
ctggcgacgggcaaccagatcgtcatcgatcatgtcgaggccctgaaaaccgccatcgcg
gacctgccggccgccgttgccgcccgcctgtcgtggtcgacggactggacgaaggacggc
ccgtttgccggtgcgctggtggaaggagacgcggcggacattcagcgcgccaatgcgcgc
attgccggcctgcccggcccgctcgtgctcgtacaggccgcgacgaccgacgaactcgtt
gctgatcccgaggcctactgcctcaactggctgctggaggaagtctccacctccatcaac
accgccgctgccggcggcaatgccagcctgatggccatcggctga

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