Schizosaccharomyces osmophilus (fission yeast): SOMG_01667
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Entry
SOMG_01667 CDS
T09274
Symbol
trm2
Name
(RefSeq) tRNA (m5U54) methyltransferase Trm2
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_01667 (trm2)
Enzymes [BR:
som01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SOMG_01667 (trm2)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
SOMG_01667 (trm2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Methyltransf_25
PrmA
Cons_hypoth95
Methyltransf_11
Met_10
Methyltransf_4
MTS
Methyltransf_23
Methyltransf_12
Ubie_methyltran
Roughex
Motif
Other DBs
NCBI-GeneID:
80875149
NCBI-ProteinID:
XP_056037196
LinkDB
All DBs
Position
1:complement(join(3656318..3656341,3656448..3656696,3656745..3657582,3657681..3657780,3657895..3658210))
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AA seq
508 aa
AA seq
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MIVSVFQRGHFPKLLFTKFLRSSFSTSTSYHMTTELNRPLQVPEISNKRARKLSKRRAKK
PVVEGSAGHVLQLDIENLLEHQPLANIPFERFQEIEVDIVYLSSSGDGIGLVLDGRYAVV
VPFSLPGDKVKAKLHFLADTYALADFLGVLTPSKDRDDSLIGCKYFGKCGGCQYQMLPYE
KQLEQKKKVIEKAFRYFSKLDPSKLPQVENTIGSPLEYNYRTKITPHFDVPKGGTSGPLT
IGFQEKGRRRVLDIEECPIATKQINESYPKIIGEVQDRASTYKRGATILMRDSMNSNGEH
SVITDHKAIVTESFGDFKFVFPAGAFFQNNNSILPDFTGYVRKQLLNPFKHENFQKPKYF
VDAYCGSGLFSIACSEGFESVIGVEISADSVHYAKENAQRNNVSNTNFIVGEAEKIFSSI
KTPSAETAMVIDPPRKGCDQVFLNQLLEYGPSRAVYISCNVHTQARDVGYILHHELGKNY
KIDEIRGFDLFPQSHHVESILTLTKLNY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatagtttcagtgtttcaaagaggtcactttcctaaacttctttttaccaaatttttg
cgctcctcattttcaacatcaacttcataccatatgactactgaattaaatcggccgttg
caagtgccagaaatttctaacaaaagagcaagaaaactttcaaaaagacgtgctaaaaag
cctgtcgtagaaggaagtgctggccatgtattgcaattagacattgagaatctcttggag
catcaacctttggcgaatataccctttgaaagatttcaagaaatagaagtagatatagtg
tatttgagttcctcaggagatggaattggcttagttttggacggtcgttacgctgtcgtt
gtacccttttcactacccggagataaagtgaaagctaaattgcactttttagcagataca
tatgctctggctgattttctaggagtgttaacaccttccaaagatagagatgactcccta
attggatgtaaatattttggaaaatgcggaggttgtcaataccaaatgcttccctatgag
aagcaacttgagcagaagaaaaaggtaatcgaaaaggcctttcggtatttttcaaagttg
gacccttcaaagcttccacaggttgaaaatacgataggaagccctttggagtataactac
agaactaaaatcactcctcattttgacgttcctaaaggcggtacgagtggaccattgacc
attggttttcaagagaaaggtagaagacgagtattggatattgaagagtgtccaatagct
acgaagcaaataaatgaatcatatccaaagataattggcgaggtacaagatcgtgcatct
acatacaagcgaggagccacaattctcatgcgtgattccatgaacagcaatggggaacat
tcggtcatcactgaccacaaagctattgttactgagtcatttggagatttcaagttcgtg
ttcccagcaggtgcattttttcaaaataataactcaattttgcctgactttactggttat
gttagaaaacagttgctgaatcccttcaaacatgaaaactttcaaaagccgaagtacttt
gttgatgcttactgtggatcaggattgtttagtatcgcttgctcggaaggatttgaatct
gtaatcggtgttgaaatttctgctgacagtgtacattatgcaaaggaaaatgctcagcga
aataacgtttctaatacaaacttcattgttggagaagcagaaaagatattttcaagcatt
aaaacgccctctgcggagactgcgatggtaattgatcctcctagaaaggggtgtgaccaa
gtttttttgaaccaattgttagagtatggaccatcccgtgctgtttacatttcctgtaac
gttcatacccaagctcgagatgtcgggtatatcctgcatcatgaacttggtaaaaactat
aaaatcgacgaaattcgtggttttgatttgttcccacaatcccatcatgtcgaaagcatt
ttgactttgacaaaactcaactattga
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