Schizosaccharomyces osmophilus (fission yeast): SOMG_03854
Help
Entry
SOMG_03854 CDS
T09274
Symbol
rpb9
Name
(RefSeq) DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_03854 (rpb9)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_03854 (rpb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_03854 (rpb9)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_03854 (rpb9)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SOMG_03854 (rpb9)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SOMG_03854 (rpb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_C
RNA_POL_M_15KD
Elf1
DUF3716
DZR
GpA_ATPase
Motif
Other DBs
NCBI-GeneID:
80877330
NCBI-ProteinID:
XP_056038384
LinkDB
All DBs
Position
2:join(2997338..2997378,2997436..2997502,2997635..2997684,2997741..2997873,2997929..2997979)
Genome browser
AA seq
113 aa
AA seq
DB search
MSNFQYCIECNNMLYPREDKVTRILRLACRNCDYSEVAASSKVYRHELMTSNVEGLHFSQ
DAATDYTLPRTEKECPRCHHHEAVFYQMHSRRGDSRMTLVYVCAGCGFAYEDQ
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttcaatattgtattgagtgtaacaacatgctatatccaagagaggataaa
gtcaccagaattcttcgattagcctgcagaaattgtgactattcagaggttgctgccagt
agcaaggtctatcgacatgagttgatgacatcgaatgtcgaaggtcttcatttctctcaa
gatgctgcaactgattacacccttccacggactgaaaaagaatgtcctcgttgtcaccat
catgaagccgttttctaccagatgcattcacgccgcggcgattcaagaatgacgttggta
tacgtgtgcgcaggttgcggttttgcatacgaggatcaataa
DBGET
integrated database retrieval system