Spirosoma oryzicola: LQ777_13530
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Entry
LQ777_13530 CDS
T08981
Name
(GenBank) TIM barrel protein
KO
K01820
L-rhamnose isomerase / sugar isomerase [EC:
5.3.1.14
5.3.1.-]
Organism
soq
Spirosoma oryzicola
Pathway
soq00040
Pentose and glucuronate interconversions
soq00051
Fructose and mannose metabolism
soq01100
Metabolic pathways
soq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LQ777_13530
00051 Fructose and mannose metabolism
LQ777_13530
Enzymes [BR:
soq01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.14 L-rhamnose isomerase
LQ777_13530
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GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UHG89265
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Position
3183230..3184504
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AA seq
424 aa
AA seq
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MQLESYQIADHNNSLQESHQRKLAYWTEELANAEAIIAKLIDFQIAIPSWALGTGGTRFG
RFAGGGEPRSLEEKLEDIGLLHALNQSSGAISLHIPWDIPTDPEAIKQLAAQHGIRFDAM
NSNTFQDQPDQPLSYKFGSLQHVDPAVRQQAIDHNIEVIRHGIALGSDSLTVWLSDGSCF
PGQLNFRKAFDRTLGSLQAIYEALPDDWKLLVEYKAYEPNFYSTTIGDWGSSLLYATKLG
PKAYTLVDLGHHLPNANIEQIVAILLNEKKLGGFHFNDSKYGDDDLTAGSIKPYQLFLIF
NELVDGLDARGLDHATSLGWMIDASHNVKDPLEDLLQSVEAIQLAYAQALLVDRVALEEA
REANDVVRAQEILQEAFRTDIRPLVAEARRRAGGALQPLALFRQLAVRQKLIGERGAKTI
ATGL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgaatcgtatcaaattgccgaccataacaacagccttcaggaaagtcaccag
cgtaaactggcgtactggaccgaagaactggcgaacgcggaagcgatcattgcaaaactt
attgattttcagatcgctattccgagctgggcgctgggaacgggtggcactcgcttcggg
cggttcgccgggggcggtgagccgcgttccctggaagaaaagctcgaagacatcggtttg
ctgcacgccctgaaccagtcgagcggagccatttcgctgcacattccctgggatattccg
acggaccccgaagcaatcaaacaactagccgctcagcatggtatccggttcgatgccatg
aactcgaacacgtttcaggatcagccggaccagccgctcagctataagttcgggtcgttg
cagcacgtcgatccggcggttcggcagcaggctatcgaccacaacatcgaggtaattcgg
cacggtattgcgcttggctccgattcgctgacggtctggctgtcggatgggtcctgtttt
ccgggtcagctcaatttccgcaaggcgtttgaccggacattaggcagccttcaggcgatc
tacgaagccctgcccgacgactggaaactgctcgttgaatacaaagcctacgaaccgaat
ttttattcgactacgattggcgactggggttcgtcgttgctgtacgccaccaagctcggt
cccaaagcctacacgctggtcgatctgggtcaccacctgcccaatgccaacatcgagcaa
atcgttgctattctgctgaacgagaaaaaactcggcggttttcattttaacgactccaaa
tacggggacgacgatttaacggcgggcagcatcaaaccctaccagctgtttctgatcttc
aacgaactcgttgacggattggacgcgcgcggtctggatcacgcaacgagtctgggctgg
atgatcgacgcttcgcacaacgtgaaagacccgctggaagatttgctccaatccgttgaa
gcgatccaactggcctacgcgcaggcgctgctggtcgatcgggtggccctggaagaagca
cgggaagccaacgatgtcgttcgggcgcaggagatcttgcaggaagcgttccgtaccgac
attcgaccgctggtagccgaagcccgtcggcgggcgggcggtgcgctccaaccgctggct
ttatttcgccagttagccgtccgccagaagcttatcggcgaacgcggtgccaagaccatc
gccaccggtttataa
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